SCOPe 2.06: Domain d5o6sd1: 5o6s D:1-73

Lineage for d5o6sd1 (5o6s D:1-73)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.15: beta-Grasp (ubiquitin-like) [54235] (14 superfamilies)
   core: beta(2)-alpha-beta(2); mixed beta-sheet 2143

4. Superfamily d.15.1: Ubiquitin-like [54236] (11 families)

5. Family d.15.1.1: Ubiquitin-related [54237] (39 proteins)
   Pfam PF00240

6. Protein Ubiquitin [54238] (8 species)

7. Species Human (Homo sapiens) [TaxId:9606] [54239] (209 PDB entries)
   Uniprot P62988
   identical sequence in many other species

8. Domain d5o6sd1: 5o6s D:1-73 [341012]
   Other proteins in same PDB: d5o6sa2, d5o6sb2, d5o6sc2, d5o6sd2, d5o6se2, d5o6sf2
   automated match to d5ibkc_

Details for d5o6sd1

PDB Entry: 5o6s, 2.9 Å

PDB Description: ubv.b4r, a dimeric ubiquitin variant binding to birc4 ring

PDB Compounds: (D:) Polyubiquitin-B

SCOPe Domain Sequences for d5o6sd1:

Sequence; same for both SEQRES and ATOM records:

>d5o6sd1 d.15.1.1 (D:1-73) Ubiquitin {Human (Homo sapiens) [TaxId: 9606]}
mqilvttisaetirlevepsdtienvkakiqdkegippdqqrlffegkqledgrtlsdyn
inkkstlllvvkf

Timeline for d5o6sd1:

• d5o6sd1 is new in SCOPe 2.06-stable
  
• d5o6sd1 appears in SCOPe 2.07
  
• d5o6sd1 appears in the current release, SCOPe 2.08