Lineage for Species: Escherichia coli [TaxId: 83334]

  1. Root: SCOPe 2.08
  2. Class a: All alpha proteins [46456] (290 folds)
  3. Fold a.4: DNA/RNA-binding 3-helical bundle [46688] (14 superfamilies)
    core: 3-helices; bundle, closed or partly opened, right-handed twist; up-and down
  4. Superfamily a.4.12: TrpR-like [48295] (4 families) (S)
    contains an extra shared helix after the HTH motif
  5. Family a.4.12.1: Trp repressor, TrpR [48296] (2 proteins)
    intertwined dimer of identical 6-helical subunits
    automatically mapped to Pfam PF01371
  6. Protein automated matches [254650] (4 species)
    not a true protein
  7. Species Escherichia coli [TaxId:83334] [340663] (7 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 83334]:

  1. Domain(s) for 5tm0:
    1. Domain d5tm0a_: 5tm0 A: [340717]
      automated match to d1co0a_
    2. Domain d5tm0b_: 5tm0 B: [340678]
      automated match to d1co0a_
    3. Domain d5tm0c_: 5tm0 C: [340690]
      automated match to d1co0a_
    4. Domain d5tm0d_: 5tm0 D: [340664]
      automated match to d1co0a_
  2. Domain(s) for 6ejw:
    1. Domain d6ejwa_: 6ejw A: [364414]
      automated match to d5tm0a_
      complexed with iac
    2. Domain d6ejwb_: 6ejw B: [364394]
      automated match to d5tm0a_
      complexed with iac
    3. Domain d6ejwc_: 6ejw C: [364427]
      automated match to d5tm0a_
      complexed with iac
    4. Domain d6ejwd_: 6ejw D: [364428]
      automated match to d5tm0a_
      complexed with iac
  3. Domain(s) for 6eni:
    1. Domain d6enia_: 6eni A: [364401]
      automated match to d5tm0a_
      complexed with edo, iac
    2. Domain d6enib_: 6eni B: [364403]
      automated match to d5tm0a_
      complexed with edo, iac
  4. Domain(s) for 6enn:
    1. Domain d6enna_: 6enn A: [364462]
      automated match to d5tm0a_
      complexed with iac
    2. Domain d6ennb_: 6enn B: [364411]
      automated match to d5tm0a_
      complexed with iac
  5. Domain(s) for 6f7f:
    1. Domain d6f7fa_: 6f7f A: [366764]
      automated match to d5tm0a_
      complexed with iop
    2. Domain d6f7fb_: 6f7f B: [366789]
      automated match to d5tm0a_
      complexed with iop
    3. Domain d6f7fc_: 6f7f C: [366783]
      automated match to d5tm0a_
      complexed with iop
    4. Domain d6f7fd_: 6f7f D: [366801]
      automated match to d5tm0a_
      complexed with iop
  6. Domain(s) for 6f7g:
  7. Domain(s) for 6fal:
    1. Domain d6fala_: 6fal A: [363147]
      Other proteins in same PDB: d6falb2
      automated match to d5tm0a_
      complexed with iop
    2. Domain d6falb1: 6fal B:13-108 [363131]
      Other proteins in same PDB: d6falb2
      automated match to d5tm0a_
      complexed with iop

More info for Species Escherichia coli [TaxId:83334] from a.4.12.1 automated matches

Timeline for Species Escherichia coli [TaxId:83334] from a.4.12.1 automated matches: