SCOPe 2.07: Domain d5okaa_: 5oka A:

Lineage for d5okaa_ (5oka A:)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (125 species)
   not a true protein

7. Species Geobacillus stearothermophilus [TaxId:1422] [319127] (16 PDB entries)

8. Domain d5okaa_: 5oka A: [340602]
   automated match to d1pbga_
   complexed with gol, imd; mutant

Details for d5okaa_

PDB Entry: 5oka, 1.25 Å

PDB Description: non-conservatively refined structure of gan1d-e170q, a catalytic mutant of a 6-phospho-beta-galactosidase from geobacillus stearothermophilus

PDB Compounds: (A:) Putative 6-phospho-beta-galactobiosidase

SCOPe Domain Sequences for d5okaa_:

Sequence, based on SEQRES records:

>d5okaa_ c.1.8.0 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
rhlkpfppeflwgaasaayqvegawnedgkglsvwdvfakqpgrtfkgtngdvavdhyhr
yqedvalmaemglkayrfsvswsrvfpdgngavnekgldfydrlieelrnhgiepivtly
hwdvpqalmdaygawesrriiddfdryavtlfqrfgdrvkywvtlnqqnifisfgyrlgl
hppgvkdmkrmyeanhianlanakviqsfrhyvpdgkigpsfayspmypydsrpenvlaf
enaeefqnhwwmdvyawgmypqaawnylesqgleptvapgdwellqaakpdfmgvnyyqt
ttvehnppdgvgegvmnttgkkgtstssgipglfktvrnphvdttnwdwaidpvglrigl
rrianryqlpilitenglgefdtlepgdivnddyridylrrhvqeiqraitdgvdvlgyc
awsftdllswlngyqkrygfvyvnrddesekdlrrikkksfywyqrvietngael

Sequence, based on observed residues (ATOM records):

>d5okaa_ c.1.8.0 (A:) automated matches {Geobacillus stearothermophilus [TaxId: 1422]}
rhlkpfppeflwgaasaayqvegawnedgkglsvwdvfakqpgrtfkgtngdvavdhyhr
yqedvalmaemglkayrfsvswsrvfpdgngavnekgldfydrlieelrnhgiepivtly
hwdvpqalmdaygawesrriiddfdryavtlfqrfgdrvkywvtlnqqnifisfgyrlgl
hppgvkdmkrmyeanhianlanakviqsfrhyvpdgkigpsfayspmypydsrpenvlaf
enaeefqnhwwmdvyawgmypqaawnylesqgleptvapgdwellqaakpdfmgvnyyqt
ttvehnppdgvgtssgipglfktvrnphvdttnwdwaidpvglriglrrianryqlpili
tenglgefdtlepgdivnddyridylrrhvqeiqraitdgvdvlgycawsftdllswlng
yqkrygfvyvnrddesekdlrrikkksfywyqrvietngael

Timeline for d5okaa_:

• d5okaa_ first appeared in SCOPe 2.06
  
• d5okaa_ appears in the current release, SCOPe 2.08