SCOPe 2.07: Domain d5ng1f2: 5ng1 F:77-378

Lineage for d5ng1f2 (5ng1 F:77-378)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.10: Tubulin tyrosine ligase (TTL) C-terminal domain-like [310626] (2 proteins)
   Pfam PF03133; PubMed 22020298

6. Protein Tubulin tyrosine ligase (TTL) C-terminal domain [310728] (3 species)

7. Species Chicken (Gallus gallus) [TaxId:9031] [311385] (158 PDB entries)

8. Domain d5ng1f2: 5ng1 F:77-378 [340517]
   Other proteins in same PDB: d5ng1a1, d5ng1a2, d5ng1b1, d5ng1b2, d5ng1c1, d5ng1c2, d5ng1d1, d5ng1d2, d5ng1e_, d5ng1f1, d5ng1f3
   automated match to d3tiia2
   complexed with 8wb, 8we, acp, ca, gdp, gol, gtp, mes, mg, zpn

Details for d5ng1f2

PDB Entry: 5ng1, 2.2 Å

PDB Description: tubulin-mtc-zampanolide complex

PDB Compounds: (F:) Tubulin-tyrosine ligase

SCOPe Domain Sequences for d5ng1f2:

Sequence, based on SEQRES records:

>d5ng1f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnlktpvapaqngirhlinntrtderevflaayn
rrregregnvwiakssagakgegilisseaselldfideqgqvhviqkylekplllepgh
rkfdirswvlvdhlyniylyregvlrtssepynsanfqdktchltnhciqkeysknygry
eegnemffeefnqylmdalnttlensillqikhiirsclmciepaistkhlhyqsfqlfg
fdfmvdeelkvwlievngapacaqklyaelcqgivdvaissvfpladtgqktsqptsifi
kl

Sequence, based on observed residues (ATOM records):

>d5ng1f2 d.142.1.10 (F:77-378) Tubulin tyrosine ligase (TTL) C-terminal domain {Chicken (Gallus gallus) [TaxId: 9031]}
lvkliktspelsesctwfpesyviyptnltderevflaaynrrregregnvwiakssaga
kgegilisseaselldfideqgqvhviqkylekplllepghrkfdirswvlvdhlyniyl
yregvlrtssepynsanfqdktchltnhciqkeysknygryeegnemffeefnqylmdal
nttlensillqikhiirsclmciepaistkhlhyqsfqlfgfdfmvdeelkvwlievnga
pacaqklyaelcqgivdvaissvfplaptsifikl

Timeline for d5ng1f2:

• d5ng1f2 first appeared in SCOPe 2.06
  
• d5ng1f2 appears in the current release, SCOPe 2.08