Lineage for d5ohpa_ (5ohp A:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2498051Family d.3.1.0: automated matches [191342] (1 protein)
    not a true family
  6. 2498052Protein automated matches [190230] (21 species)
    not a true protein
  7. 2498073Species Human (Homo sapiens) [TaxId:9606] [187072] (48 PDB entries)
  8. 2498150Domain d5ohpa_: 5ohp A: [339288]
    Other proteins in same PDB: d5ohpb_, d5ohpc_
    automated match to d2ibia1
    complexed with zn

Details for d5ohpa_

PDB Entry: 5ohp (more details), 2.8 Å

PDB Description: crystal structure of usp30 (c77a) in complex with lys6-linked diubiquitin
PDB Compounds: (A:) Ubiquitin carboxyl-terminal hydrolase 30

SCOPe Domain Sequences for d5ohpa_:

Sequence, based on SEQRES records: (download)

>d5ohpa_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
kglvpglvnlgntafmnsllqglsacpafirwleeftsqysrdqkeppshqylsltllhl
lkalscqevtddevldasclldvlrmyrwqissfeeqdahelfhvitsslederdgsgsh
wksqhpfhgrltsnmvckhcehqspvrfdtfdslslsipaatwghpltldhclhhfisse
svrdvvcdnctkieakgtlngekvehqrttfvkqlklgklpqclcihlqrlswsshgtpl
krhehvqfnedlsmdeykyhsnastylfrlmavvvhhgdmhsghfvtyrrsppsarnpls
tsnqwlwvsddtvrkaslqevlsssayllfyerv

Sequence, based on observed residues (ATOM records): (download)

>d5ohpa_ d.3.1.0 (A:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
kglvpglvnlgntafmnsllqglsacpafirwleeftsqyshqylsltllhllkalscqe
vtddevldasclldvlrmyrwqissfeeqdahelfhvitsslederdgsgshwksqhpfh
grltsnmvckhcehqspvrfdtfdslslsipaatwghpltldhclhhfissesvrdvvcd
nctkiehqrttfvkqlklgklpqclcihlqrlswsshgtplkrhehvqfnedlsmdeyky
hsnastylfrlmavvvhhgdmhsghfvtyrrsppsarnplstsnqwlwvsddtvrkaslq
evlsssayllfyerv

SCOPe Domain Coordinates for d5ohpa_:

Click to download the PDB-style file with coordinates for d5ohpa_.
(The format of our PDB-style files is described here.)

Timeline for d5ohpa_: