SCOPe 2.06: Domain d5orba1: 5orb A:1858-1971

Lineage for d5orba1 (5orb A:1858-1971)

1. Root: SCOPe 2.06

2. Class a: All alpha proteins [46456] (289 folds)

3. Fold a.29: Bromodomain-like [47363] (15 superfamilies)
   4 helices; bundle; minor mirror variant of up-and-down topology

4. Superfamily a.29.2: Bromodomain [47370] (2 families)

5. Family a.29.2.0: automated matches [191428] (1 protein)
   not a true family

6. Protein automated matches [190615] (10 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [187641] (647 PDB entries)

8. Domain d5orba1: 5orb A:1858-1971 [338937]
   Other proteins in same PDB: d5orba2
   automated match to d3uv2a_
   complexed with edo, jr6

Details for d5orba1

PDB Entry: 5orb, 2.1 Å

PDB Description: crystal structure of baz2b bromodomain in complex with 1-methyl- cyclopentapyrazole compound 30

PDB Compounds: (A:) Bromodomain adjacent to zinc finger domain protein 2B

SCOPe Domain Sequences for d5orba1:

Sequence; same for both SEQRES and ATOM records:

>d5orba1 a.29.2.0 (A:1858-1971) automated matches {Human (Homo sapiens) [TaxId: 9606]}
svkkpkrddskdlalcsmiltemethedawpfllpvnlklvpgykkvikkpmdfstirek
lssgqypnletfaldvrlvfdncetfneddsdigraghnmrkyfekkwtdtfkv

Timeline for d5orba1:

• d5orba1 is new in SCOPe 2.06-stable
  
• d5orba1 appears in SCOPe 2.07
  
• d5orba1 appears in the current release, SCOPe 2.08