SCOPe 2.08: Domain d5vxje_: 5vxj E:

Lineage for d5vxje_ (5vxj E:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.250: IpaD-like [140692] (1 superfamily)
   6 helices; bundle, up-and-down; can be divided into two four-helical bundles sharing two helices (3 and 6), which are twice longer than the rest

4. Superfamily a.250.1: IpaD-like [140693] (2 families)

5. Family a.250.1.1: IpaD-like [140694] (3 proteins)
   Pfam PF06511

6. Protein automated matches [191266] (1 species)
   not a true protein

7. Species Shigella flexneri [TaxId:623] [189835] (7 PDB entries)

8. Domain d5vxje_: 5vxj E: [338794]
   Other proteins in same PDB: d5vxjb_, d5vxjd_, d5vxjf_, d5vxjh_, d5vxjj_
   automated match to d2j0oa1

Details for d5vxje_

PDB Entry: 5vxj, 2.5 Å

PDB Description: 2.50 a resolution structure of ipad from shigella flexneri in complex with single-domain antibody jmk-e3

PDB Compounds: (E:) invasin ipad

SCOPe Domain Sequences for d5vxje_:

Sequence, based on SEQRES records:

>d5vxje_ a.250.1.1 (E:) automated matches {Shigella flexneri [TaxId: 623]}
ssltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqlldilsr
neypinkdarellhsapkeaeldgdqmishrelwakiansindineqylkvyehavssyt
qmyqdfsavlsslagwispggndgnsvklqvnslkkaleelkekykdkplypanntvsqe
qankwltelggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnakyqawna
gfsaedetmknnlqtlvqkysnansifdnlvkvlsstisss

Sequence, based on observed residues (ATOM records):

>d5vxje_ a.250.1.1 (E:) automated matches {Shigella flexneri [TaxId: 623]}
ssltmlndtlhnirttnqalkkelsqktltktsleeialhssqismdvnksaqlldilsr
neypinkdarellhsapkeaelqmishrelwakiansindineqylkvyehavssytqmy
qdfsavlsslagwispggndgnsvklqvnslkkaleelkekykdkplypanntvsqeqan
kwltelggtigkvsqknggyvvsinmtpidnmlksldnlggngevvldnakyqawnagfs
aedetmknnlqtlvqkysnansifdnlvkvlsstisss

Timeline for d5vxje_:

• d5vxje_ first appeared in SCOPe 2.06
  
• d5vxje_ appears in SCOPe 2.07