SCOPe 2.07: Domain d5vi7a1: 5vi7 A:179-481

Lineage for d5vi7a1 (5vi7 A:179-481)

1. Root: SCOPe 2.07

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.37: P-loop containing nucleoside triphosphate hydrolases [52539] (1 superfamily)
   3 layers: a/b/a, parallel or mixed beta-sheets of variable sizes

4. Superfamily c.37.1: P-loop containing nucleoside triphosphate hydrolases [52540] (26 families)
   division into families based on beta-sheet topologies

5. Family c.37.1.14: RNA helicase [52724] (4 proteins)
   duplication: consists of two similar domains, one binds NTP and the other binds RNA; also contains an all-alpha subdomain in the C-terminal extension

6. Protein automated matches [226986] (8 species)
   not a true protein

7. Species Zika virus [TaxId:64320] [317808] (28 PDB entries)

8. Domain d5vi7a1: 5vi7 A:179-481 [338748]
   Other proteins in same PDB: d5vi7a2, d5vi7a3
   automated match to d2bhra2
   complexed with so4

Details for d5vi7a1

PDB Entry: 5vi7, 2.01 Å

PDB Description: crystal structure of the zika virus ns3 helicase

PDB Compounds: (A:) Helicase

SCOPe Domain Sequences for d5vi7a1:

Sequence, based on SEQRES records:

>d5vi7a1 c.37.1.14 (A:179-481) automated matches {Zika virus [TaxId: 64320]}
fepsmlkkkqltvldlhpgagktrrvlpeivreaikkrlrtvilaptrvvaaemeealrg
lpvrymttavnvthsgteivdlmchatftsrllqpirvpnynlyimdeahftdpssiaar
gyistrvemgeaaaifmtatppgtrdafpdsnspimdtevevperawssgfdwvtdhsgk
tvwfvpsvrngneiaacltkagkrviqlsrktfetefqktknqewdfvittdisemganf
kadrvidsrrclkpvildgervilagpmpvthasaaqrrgrigrnpnkpgdeymygggca
etd

Sequence, based on observed residues (ATOM records):

>d5vi7a1 c.37.1.14 (A:179-481) automated matches {Zika virus [TaxId: 64320]}
fepsmlkkkqltvldlhpgagktrrvlpeivreaikkrlrtvilaptrvvaaemeealrg
lpvrymthsgteivdlmchatftsrllqpirvpnynlyimdeahftdpssiaargyistr
vemgeaaaifmtatppgtrdafpdsnspimdtevevperawssgfdwvtdhsgktvwfvp
svrngneiaacltkagkrviqlsrktfetefqktknqewdfvittdisemganfkadrvi
dsrrclkpvildgervilagpmpvthasaaqrrgrigrnpnkpgdeymygggcaetd

Timeline for d5vi7a1:

• d5vi7a1 first appeared in SCOPe 2.06
  
• d5vi7a1 appears in the current release, SCOPe 2.08