Lineage for d5t5vb2 (5t5v B:150-839)

  1. Root: SCOPe 2.07
  2. 2299346Class a: All alpha proteins [46456] (289 folds)
  3. 2334663Fold a.119: Lipoxigenase [48483] (1 superfamily)
    multihelical
    large nearly all-alpha domain
  4. 2334664Superfamily a.119.1: Lipoxigenase [48484] (3 families) (S)
  5. 2334665Family a.119.1.1: Plant lipoxigenases [48485] (2 protein domains)
    automatically mapped to Pfam PF00305
  6. 2334666Protein Lipoxigenase, C-terminal domain [48486] (2 species)
    N-terminal domain is beta-sandwich similar to colipase-binding domain of pancreatic lipase
    contains alpha plus beta subdomain: res. 341-495; alpha-beta(5)-alpha
  7. 2334667Species Soybean (Glycine max), isozyme L1 [TaxId:3847] [48487] (22 PDB entries)
  8. 2334690Domain d5t5vb2: 5t5v B:150-839 [338665]
    Other proteins in same PDB: d5t5va1, d5t5vb1
    automated match to d1f8na1
    complexed with fe

Details for d5t5vb2

PDB Entry: 5t5v (more details), 1.8 Å

PDB Description: lipoxygenase-1 (soybean) at 293k
PDB Compounds: (B:) Seed linoleate 13S-lipoxygenase-1

SCOPe Domain Sequences for d5t5vb2:

Sequence, based on SEQRES records: (download)

>d5t5vb2 a.119.1.1 (B:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
vpsetpaplveyreeelkslrgngtgerkeydriydydvyndlgnpdkseklarpvlggs
stfpyprrgrtgrgptvtdpntekqgevfyvprdenlghlkskdaleigtkslsqivqpa
fesafdlkstpiefhsfqdvhdlyeggiklprdvistiiplpvikelyrtdgqhilkfpq
phvvqvsqsawmtdeefaremiagvnpcvirgleefppksnldpaiygdqsskitadsld
ldgytmdealgsrrlfmldyhdifmpyvrqinqlnsaktyatrtilflredgtlkpvaie
lslphsagdlsaavsqvvlpakegvestiwllakayvivndscyhqlmshwlnthaamep
fviathrhlsvlhpiyklltphyrnnmninalarqslinangiiettflpskysvemssa
vyknwvftdqalpadlikrgvaikdpstphgvrlliedypyaadgleiwaaiktwvqeyv
plyyardddvkndselqhwwkeavekghgdlkdkpwwpklqtledlvevcliiiwiasal
haavnfgqypygglimnrptasrrllpekgtpeyeeminnhekaylrtitsklptlisls
vieilsthasdevylgqrdnphwtsdskalqafqkfgnklkeieeklvrrnndpslqgnr
lgpvqlpytllypsseegltfrgipnsisi

Sequence, based on observed residues (ATOM records): (download)

>d5t5vb2 a.119.1.1 (B:150-839) Lipoxigenase, C-terminal domain {Soybean (Glycine max), isozyme L1 [TaxId: 3847]}
vpsetpaplveyreeelkslrgngtgerkeydriydydvyndlgnpdkseklarpvlggs
stfpyprrgrtgrgptvtdpntekqgevfyvprdenlghlkskdaleigtkslsqivqpa
fesafdlkstpiefhsfqdvhdlyeggiklprdvistiiplpvikelyrtdgqhilkfpq
phvvqvsqsawmtdeefaremiagvnpcvirgleefppksnldpaiygdqsskitadsld
ldgytmdealgsrrlfmldyhdifmpyvrqinqlnsaktyatrtilflredgtlkpvaie
lslphavsqvvlpakegvestiwllakayvivndscyhqlmshwlnthaamepfviathr
hlsvlhpiyklltphyrnnmninalarqslinangiiettflpskysvemssavyknwvf
tdqalpadlikrgvaikdpstphgvrlliedypyaadgleiwaaiktwvqeyvplyyard
ddvkndselqhwwkeavekghgdlkdkpwwpklqtledlvevcliiiwiasalhaavnfg
qypygglimnrptasrrllpekgtpeyeeminnhekaylrtitsklptlislsvieilst
hasdevylgqrdnphwtsdskalqafqkfgnklkeieeklvrrnndpslqgnrlgpvqlp
ytllypsseegltfrgipnsisi

SCOPe Domain Coordinates for d5t5vb2:

Click to download the PDB-style file with coordinates for d5t5vb2.
(The format of our PDB-style files is described here.)

Timeline for d5t5vb2:

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Domains from same chain:
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d5t5vb1