Lineage for d5m2mg_ (5m2m G:)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2048772Fold b.22: TNF-like [49841] (1 superfamily)
    sandwich, 10 strands in 2 sheets; jelly-roll
  4. 2048773Superfamily b.22.1: TNF-like [49842] (2 families) (S)
  5. 2048774Family b.22.1.1: TNF-like [49843] (15 proteins)
  6. 2048971Protein Tumor necrosis factor (TNF) [49848] (2 species)
  7. 2048972Species Human (Homo sapiens) [TaxId:9606] [49849] (19 PDB entries)
  8. 2049010Domain d5m2mg_: 5m2m G: [338616]
    Other proteins in same PDB: d5m2md_, d5m2me_, d5m2mf_, d5m2mh_, d5m2mj_, d5m2mn_
    automated match to d1a8ma_

Details for d5m2mg_

PDB Entry: 5m2m (more details), 2.3 Å

PDB Description: complex between human tnf alpha and llama vhh3
PDB Compounds: (G:) Tumor necrosis factor

SCOPe Domain Sequences for d5m2mg_:

Sequence, based on SEQRES records: (download)

>d5m2mg_ b.22.1.1 (G:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
tpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkg
qgcpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfql
ekgdrlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records): (download)

>d5m2mg_ b.22.1.1 (G:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
tpsdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkg
qgcpthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqle
kgdrlsaeinrpdyldfaesgqvyfgiial

SCOPe Domain Coordinates for d5m2mg_:

Click to download the PDB-style file with coordinates for d5m2mg_.
(The format of our PDB-style files is described here.)

Timeline for d5m2mg_: