SCOPe 2.08: Domain d5m2ja_: 5m2j A:

Lineage for d5m2ja_ (5m2j A:)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.22: TNF-like [49841] (1 superfamily)
   sandwich, 10 strands in 2 sheets; jelly-roll

4. Superfamily b.22.1: TNF-like [49842] (2 families)

5. Family b.22.1.1: TNF-like [49843] (15 proteins)

6. Protein Tumor necrosis factor (TNF) [49848] (3 species)

7. Species Human (Homo sapiens) [TaxId:9606] [49849] (33 PDB entries)

8. Domain d5m2ja_: 5m2j A: [338571]
   Other proteins in same PDB: d5m2jd_
   automated match to d1a8ma_

Details for d5m2ja_

PDB Entry: 5m2j, 1.9 Å

PDB Description: complex between human tnf alpha and llama vhh2

PDB Compounds: (A:) Tumor necrosis factor

SCOPe Domain Sequences for d5m2ja_:

Sequence, based on SEQRES records:

>d5m2ja_ b.22.1.1 (A:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqretpegaeakpwyepiylggvfqlek
gdrlsaeinrpdyldfaesgqvyfgiial

Sequence, based on observed residues (ATOM records):

>d5m2ja_ b.22.1.1 (A:) Tumor necrosis factor (TNF) {Human (Homo sapiens) [TaxId: 9606]}
sdkpvahvvanpqaegqlqwlnrranallangvelrdnqlvvpseglyliysqvlfkgqg
cpsthvllthtisriavsyqtkvnllsaikspcqpwyepiylggvfqlekgdrlsaeinr
pdyldfaesgqvyfgiial

Timeline for d5m2ja_:

• d5m2ja_ first appeared in SCOPe 2.06
  
• d5m2ja_ appears in SCOPe 2.07