SCOPe 2.08: Domain d5ojkb_: 5ojk B:

Lineage for d5ojkb_ (5ojk B:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.69: alpha/beta-Hydrolases [53473] (1 superfamily)
   core: 3 layers, a/b/a; mixed beta-sheet of 8 strands, order 12435678, strand 2 is antiparallel to the rest

4. Superfamily c.69.1: alpha/beta-Hydrolases [53474] (43 families)
   many members have left-handed crossover connection between strand 8 and additional strand 9

5. Family c.69.1.0: automated matches [191404] (1 protein)
   not a true family

6. Protein automated matches [190543] (131 species)
   not a true protein

7. Species Human (Homo sapiens) [TaxId:9606] [188340] (99 PDB entries)

8. Domain d5ojkb_: 5ojk B: [338235]
   automated match to d2whpb_
   complexed with nag, pge

Details for d5ojkb_

PDB Entry: 5ojk, 2.55 Å

PDB Description: crystal structure of the human neuroligin 1 cholinesterase domain containing spliced sequence b (ssb) (nl1(-a+b))

PDB Compounds: (B:) Neuroligin-1,Neuroligin-1

SCOPe Domain Sequences for d5ojkb_:

Sequence, based on SEQRES records:

>d5ojkb_ c.69.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dplvatnfgkirgikkelnneilgpviqflgvpyaapptgerrfqppeppspwsdirnat
qfapvcpqniidgrlpevmlpvwftnnldvvssyvqdqsedclylniyvpteddirdsgg
pkpvmvyihggsymegtgnlydgsvlasygnvivitvnyrlgvlgflstgdqaakgnygl
ldliqalrwtsenigffggdplritvfgsgaggscvnlltlshysegnrwsnstkglfqr
aiaqsgtalsswavsfqpakyarmlatkvgcnvsdtvelveclqkkpykelvdqdiqpar
yhiafgpvidgdvipddpqilmeqgeflnydimlgvnqgeglkfvenivdsddgisasdf
dfavsnfvdnlygypegkdvlretikfmytdwadrhnpetrrktllalftdhqwvapava
tadlhsnfgsptyfyafyhhcqtdqvpawadaahgdevpyvlgipmigptelfpcnfskn
dvmlsavvmtywtnfaktgdpnqpvpqdtkfihtkpnrfeevawtrysqkdqlylhiglk
prvkehyrankvnlwlelvphl

Sequence, based on observed residues (ATOM records):

>d5ojkb_ c.69.1.0 (B:) automated matches {Human (Homo sapiens) [TaxId: 9606]}
dplvatnfgkirgikkelnneilgpviqflgvpyaapptgerrfqppeppspwsdirnat
qfapvcpqniidrlpevmlpvwftnnldvvssyvqdqsedclylniyvptgpkpvmvyih
ggsymegtgnlydgsvlasygnvivitvnyrlgvlgflstgdqaakgnyglldliqalrw
tsenigffggdplritvfgsgaggscvnlltlshysegnrwsnstkglfqraiaqsgtal
sswavsfqpakyarmlatkvgcnvsdtvelveclqkkpykelvdqdiqparyhiafgpvi
dgdvipddpqilmeqgeflnydimlgvnqgeglkfvenivdsddgisasdfdfavsnfvd
nlygypgkdvlretikfmytdwadrhnpetrrktllalftdhqwvapavatadlhsnfgs
ptyfyafyhhcqtdqvpawadaahgdevpyvlgipmigptelfpcnfskndvmlsavvmt
ywtnfaktgdpnqpvpvawtrysqkdqlylhiglkprvkehyrankvnlwlelvphl

Timeline for d5ojkb_:

• d5ojkb_ first appeared in SCOPe 2.06
  
• d5ojkb_ appears in SCOPe 2.07