Lineage for d5my6b1 (5my6 B:6-115)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 protein domains)
  6. 2347168Protein automated matches [190119] (20 species)
    not a true protein
  7. 2347169Species Camel (Camelus dromedarius) [TaxId:9838] [187219] (33 PDB entries)
  8. 2347215Domain d5my6b1: 5my6 B:6-115 [337704]
    Other proteins in same PDB: d5my6a1, d5my6a2, d5my6a3, d5my6b2
    automated match to d4ldeb_
    complexed with gol, nag

Details for d5my6b1

PDB Entry: 5my6 (more details), 2.25 Å

PDB Description: crystal structure of a her2-nb complex
PDB Compounds: (B:) Nanobody 2Rs15d

SCOPe Domain Sequences for d5my6b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5my6b1 b.1.1.1 (B:6-115) automated matches {Camel (Camelus dromedarius) [TaxId: 9838]}
esgggsvqaggslkltcaasgyifnscgmgwyrqspgrerelvsrisgdgdtwhkesvkg
rftisqdnvkktlylqmnslkpedtavyfcavcynletywgqgtqvtvss

SCOPe Domain Coordinates for d5my6b1:

Click to download the PDB-style file with coordinates for d5my6b1.
(The format of our PDB-style files is described here.)

Timeline for d5my6b1:

  • d5my6b1 first appeared in SCOPe 2.06, called d5my6b_