Lineage for d5vzwb_ (5vzw B:)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2507728Fold d.20: UBC-like [54494] (1 superfamily)
    alpha-beta(4)-alpha(3); core: meander beta-sheet plus one helix 2
  4. 2507729Superfamily d.20.1: UBC-like [54495] (5 families) (S)
  5. 2507730Family d.20.1.1: UBC-related [54496] (7 proteins)
  6. 2507738Protein Ubiquitin conjugating enzyme, UBC [54497] (34 species)
  7. 2507884Species Human (Homo sapiens), ubch5b [TaxId:9606] [102841] (24 PDB entries)
    Uniprot P62837
    E2-17 kDa 2
  8. 2507904Domain d5vzwb_: 5vzw B: [337599]
    Other proteins in same PDB: d5vzwc1, d5vzwc2, d5vzwd1, d5vzwd2
    automated match to d2clwa_
    complexed with zn

Details for d5vzwb_

PDB Entry: 5vzw (more details), 2.28 Å

PDB Description: trim23 ring domain in complex with ubch5-ub
PDB Compounds: (B:) ubiquitin-conjugating enzyme e2 d2

SCOPe Domain Sequences for d5vzwb_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vzwb_ d.20.1.1 (B:) Ubiquitin conjugating enzyme, UBC {Human (Homo sapiens), ubch5b [TaxId: 9606]}
alkrihkelndlardppaqcragpvgddmfhwqatimgpndspyqggvffltihfptdyp
fkppkvafttriyhpninsngsikldilrsqwspaltiskvllsicsllcdpnpddplvp
eiariyktdrekynriarewtqkyam

SCOPe Domain Coordinates for d5vzwb_:

Click to download the PDB-style file with coordinates for d5vzwb_.
(The format of our PDB-style files is described here.)

Timeline for d5vzwb_: