SCOP 1.63: Domain d1noza_: 1noz A:

Lineage for d1noza_ (1noz A:)

1. Root: SCOP 1.63

2. Class c: Alpha and beta proteins (a/b) [51349] (117 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (7 families)
   consists of one domain of this fold

5. Family c.55.3.5: DnaQ-like 3'-5' exonuclease [53118] (5 proteins)

6. Protein Exonuclease domain of family B (archaeal and phage) DNA polymerases [53125] (6 species)
   elaborated with additional structures and the N-terminal subdomain
   the N-terminal subdomain of archaeal polymerases contains ferredoxin-like fold

7. Species Bacteriophage T4 [TaxId:10665] [53126] (2 PDB entries)

8. Domain d1noza_: 1noz A: [33715]

Details for d1noza_

PDB Entry: 1noz, 2.2 Å

PDB Description: t4 dna polymerase fragment (residues 1-388) at 110k

SCOP Domain Sequences for d1noza_:

Sequence, based on SEQRES records:

>d1noza_ c.55.3.5 (A:) Exonuclease domain of family B (archaeal and phage) DNA polymerases {Bacteriophage T4}
defyisietvgnniveryidengkertreveylptmfrhckeeskykdiygkncapqkfp
smkdardwmkrmediglealgmndfklayisdtygseivydrkfvrvancdievtgdkfp
dpmkaeyeidaithydsiddrfyvfdllnsmygsvskwdaklaakldceggdevpqeild
rviympfdnerdmlmeyinlweqkrpaiftgwniegfdvpyimnrvkmilgersmkrfsp
igrvkskllqnmygskeiysidgvsildyldlykkfaftnlpsfslesvaqhetkkgklp
ydgpinklretnhqryisyniidvesvqaidkirgfidlvlsmsyyakmpfsgvmspikt
wdaiifnsl

Sequence, based on observed residues (ATOM records):

>d1noza_ c.55.3.5 (A:) Exonuclease domain of family B (archaeal and phage) DNA polymerases {Bacteriophage T4}
defyisietvgnniveryidengkertreveylptmfrhckegkncapqkfpsmkdardw
mkrgmndfklayisdtygseivydrkfvrvancdievtgdkfpdpmkaeyeidaithyds
iddrfyvfdllnsmygsvskwdaklaakldceggdevpqeildrviympfdnerdmlmey
inlweqkrpaiftgwniegfdvpyimnrvkmilgersmkrfspigrvksklskeiysidg
vsildyldlykkfaftnlpsfslesvaqhetkkgklpydgpinklretnhqryisyniid
vesvqaidkirgfidlvlsmsyyakmpfsgvmspiktwdaiifnsl

Timeline for d1noza_:

• d1noza_ first appeared (with stable ids) in SCOP 1.55
  
• d1noza_ appears in SCOP 1.61
  
• d1noza_ appears in SCOP 1.65
  
• d1noza_ appears in the current release, SCOPe 2.08