Lineage for d5gn6b1 (5gn6 B:1-262)

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families) (S)
    duplication contains two domains of this fold
  5. Family c.55.1.0: automated matches [227137] (1 protein)
    not a true family
  6. Protein automated matches [226839] (64 species)
    not a true protein
  7. Species Trypanosoma brucei [TaxId:31285] [268052] (13 PDB entries)
  8. Domain d5gn6b1: 5gn6 B:1-262 [336935]
    Other proteins in same PDB: d5gn6a3, d5gn6b3, d5gn6c3, d5gn6d3
    automated match to d3wxla1
    complexed with 6y0, gol

Details for d5gn6b1

PDB Entry: 5gn6 (more details), 2.5 Å

PDB Description: crystal structure of glycerol kinase from trypanosoma brucei gambiense complexed with cumarin derivative-17b
PDB Compounds: (B:) glycerol kinase

SCOPe Domain Sequences for d5gn6b1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5gn6b1 c.55.1.0 (B:1-262) automated matches {Trypanosoma brucei [TaxId: 31285]}
mkyvgsidqgttstrfiifderqrpvsvhqvphtqhtphpgwlehdpmeifrsackcmsv
aiaklrqkdasfrkieaigitnqrettvawdrvtkeplcyapvwndlrtyditkkvtael
gggdsmfaskitglpvstyfaafkmrwmlenvpavadacrrgtlcfgtidtwlmyklsgg
kafvtdvtnasrtflmdlrtrkwspelceklkipmetlpeirsnselfgyvetdecgvaa
alnertpimgsigdqqsalfgn

SCOPe Domain Coordinates for d5gn6b1 are not available.

Timeline for d5gn6b1:

Domains from same chain:
(mouse over for more information)
d5gn6b2, d5gn6b3
Domains from other chains:
(mouse over for more information)
d5gn6a1, d5gn6a2, d5gn6a3, d5gn6c1, d5gn6c2, d5gn6c3, d5gn6d1, d5gn6d2, d5gn6d3