Lineage for d1bi4b_ (1bi4 B:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2460924Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2462855Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2463135Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 protein domains)
  6. 2463136Protein Retroviral integrase, catalytic domain [53108] (4 species)
  7. 2463142Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (56 PDB entries)
  8. 2463223Domain d1bi4b_: 1bi4 B: [33667]

Details for d1bi4b_

PDB Entry: 1bi4 (more details), 2.5 Å

PDB Description: catalytic domain of hiv-1 integrase
PDB Compounds: (B:) integrase

SCOPe Domain Sequences for d1bi4b_:

Sequence, based on SEQRES records: (download)

>d1bi4b_ c.55.3.2 (B:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqefgipynpqsqgliesmnkelkkiigqvrdqaehlktav
qmavfihnhkrkggiggysagerivdiiatdiq

Sequence, based on observed residues (ATOM records): (download)

>d1bi4b_ c.55.3.2 (B:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
spgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvhtd
ngsnftsttvkaacwwagikqefliesmnkelkkiigqvrdqaehlktavqmavfihnhk
rkggiggysagerivdiiatdiq

SCOPe Domain Coordinates for d1bi4b_:

Click to download the PDB-style file with coordinates for d1bi4b_.
(The format of our PDB-style files is described here.)

Timeline for d1bi4b_: