Lineage for d1biua_ (1biu A:)

  1. Root: SCOPe 2.07
  2. 2434694Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2491249Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2493668Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2493948Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
  6. 2493949Protein Retroviral integrase, catalytic domain [53108] (4 species)
  7. 2493955Species Human immunodeficiency virus type 1 [TaxId:11676] [53110] (73 PDB entries)
  8. 2494027Domain d1biua_: 1biu A: [33663]
    protein/DNA complex; complexed with mg

Details for d1biua_

PDB Entry: 1biu (more details), 2.5 Å

PDB Description: hiv-1 integrase core domain complexed with mg++
PDB Compounds: (A:) hiv-1 integrase

SCOPe Domain Sequences for d1biua_:

Sequence, based on SEQRES records: (download)

>d1biua_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacewggikqefgipynpqsqgviesmnkelkkiigqvrdqaehlkta
vqmavfihnkkrkggiggysagerivdiiatdiq

Sequence, based on observed residues (ATOM records): (download)

>d1biua_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Human immunodeficiency virus type 1 [TaxId: 11676]}
cspgiwqldcthlegkvilvavhvasgyieaevipaetgqetayfllklagrwpvktvht
dngsnftsttvkaacewggikqefgqgviesmnkelkkiigqvrdqaehlktavqmavfi
hnkkrkggiggysagerivdiiatdiq

SCOPe Domain Coordinates for d1biua_:

Click to download the PDB-style file with coordinates for d1biua_.
(The format of our PDB-style files is described here.)

Timeline for d1biua_: