SCOP 1.55: Domain d1c1aa2: 1c1a A:52-216

Lineage for d1c1aa2 (1c1a A:52-216)

1. Root: SCOP 1.55

2. Class c: Alpha and beta proteins (a/b) [51349] (97 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)

4. Superfamily c.55.3: Ribonuclease H-like [53098] (6 families)

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (1 protein)

6. Protein Retroviral integrase, catalytic domain [53108] (3 species)

7. Species Rous sarcoma virus (RSV, avian sarcoma virus) [53109] (21 PDB entries)

8. Domain d1c1aa2: 1c1a A:52-216 [33644]
   Other proteins in same PDB: d1c1aa1, d1c1ab1

Details for d1c1aa2

PDB Entry: 1c1a, 3.1 Å

PDB Description: crystal structure of rsv two-domain integrase

SCOP Domain Sequences for d1c1aa2:

Sequence; same for both SEQRES and ATOM records:

>d1c1aa2 c.55.3.2 (A:52-216) Retroviral integrase, catalytic domain {Rous sarcoma virus (RSV, avian sarcoma virus)}
prglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwataiav
lgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrirvla
egdgfmkriptskqgellakamyalnhkergentktpiqkhwrpt

Timeline for d1c1aa2:

• d1c1aa2 appears in SCOP 1.57
  
• d1c1aa2 appears in the current release, SCOPe 2.08