Lineage for d1c0mc2 (1c0m C:49-216)

  1. Root: SCOP 1.55
  2. 18352Class c: Alpha and beta proteins (a/b) [51349] (97 folds)
  3. 25007Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
  4. 25212Superfamily c.55.3: Ribonuclease H-like [53098] (6 families) (S)
  5. 25292Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (1 protein)
  6. 25293Protein Retroviral integrase, catalytic domain [53108] (3 species)
  7. 25321Species Rous sarcoma virus (RSV, avian sarcoma virus) [53109] (21 PDB entries)
  8. 25343Domain d1c0mc2: 1c0m C:49-216 [33642]
    Other proteins in same PDB: d1c0ma1, d1c0mb1, d1c0mc1, d1c0md1

Details for d1c0mc2

PDB Entry: 1c0m (more details), 2.53 Å

PDB Description: crystal structure of rsv two-domain integrase

SCOP Domain Sequences for d1c0mc2:

Sequence; same for both SEQRES and ATOM records: (download)

>d1c0mc2 c.55.3.2 (C:49-216) Retroviral integrase, catalytic domain {Rous sarcoma virus (RSV, avian sarcoma virus)}
gvnprglgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvavqhhwata
iavlgrpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdrir
vlaegdgfmkriptskqgellakamyalnhkergentktpiqkhwrpt

SCOP Domain Coordinates for d1c0mc2:

Click to download the PDB-style file with coordinates for d1c0mc2.
(The format of our PDB-style files is described here.)

Timeline for d1c0mc2: