SCOPe 2.04: Domain d1vsha_: 1vsh A:

Lineage for d1vsha_ (1vsh A:)

1. Root: SCOPe 2.04

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
   consists of one domain of this fold

5. Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)

6. Protein Retroviral integrase, catalytic domain [53108] (3 species)

7. Species Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries)

8. Domain d1vsha_: 1vsh A: [33633]
   complexed with epe, zn

Details for d1vsha_

PDB Entry: 1vsh, 1.95 Å

PDB Description: asv integrase core domain with zn(ii) cofactors

PDB Compounds: (A:) integrase

SCOPe Domain Sequences for d1vsha_:

Sequence; same for both SEQRES and ATOM records:

>d1vsha_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Rous sarcoma virus RSV [TaxId: 11886]}
glgplqiwqtdftleprmaprswlavtvdtassaivvtqhgrvtsvaaqhhwataiavlg
rpkaiktdngscftskstrewlarwgiahttgipgnsqgqamveranrllkdkirvlaeg
dgfmkriptskqgellakamyalnhf

Timeline for d1vsha_:

• d1vsha_ first appeared (with stable ids) in SCOP 1.55, called d1vsh__
  
• d1vsha_ appears in SCOPe 2.03
  
• d1vsha_ appears in SCOPe 2.05
  
• d1vsha_ appears in the current release, SCOPe 2.08