SCOPe 2.08: Domain d5vtra1: 5vtr A:11-329

Lineage for d5vtra1 (5vtr A:11-329)

1. Root: SCOPe 2.08

2. Class b: All beta proteins [48724] (180 folds)

3. Fold b.19: Viral protein domain [49817] (1 superfamily)
   sandwich; 9 strands in 2 sheets; jelly-roll; form trimers

4. Superfamily b.19.1: Viral protein domain [49818] (4 families)
   forms homotrimers

5. Family b.19.1.0: automated matches [227246] (1 protein)
   not a true family

6. Protein automated matches [227017] (58 species)
   not a true protein

7. Species Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId:506350] [327808] (18 PDB entries)

8. Domain d5vtra1: 5vtr A:11-329 [336289]
   Other proteins in same PDB: d5vtra2, d5vtrb_, d5vtrc2, d5vtrd_, d5vtre2, d5vtrf_
   automated match to d4xkga_
   complexed with nag, sia; mutant

Details for d5vtra1

PDB Entry: 5vtr, 2.5 Å

PDB Description: crystal structure of the a/hong kong/1/1968 (h3n2) influenza virus hemagglutinin g225l/l226s mutant in complex with 6'-sln

PDB Compounds: (A:) Hemagglutinin HA1 chain

SCOPe Domain Sequences for d5vtra1:

Sequence; same for both SEQRES and ATOM records:

>d5vtra1 b.19.1.0 (A:11-329) automated matches {Influenza A virus (strain a/hong kong/1/1968 h3n2) [TaxId: 506350]}
atlclghhavpngtlvktitddqievtnatelvqssstgkicnnphrildgidctlidal
lgdphcdvfqnetwdlfverskafsncypydvpdyaslrslvassgtlefitegftwtgv
tqnggsnackrgpgsgffsrlnwltksgstypvlnvtmpnndnfdklyiwgvhhpstnqe
qtslyvqasgrvtvstrrsqqtiipnigsrpwvrlsssrisiywtivkpgdvlvinsngn
liaprgyfkmrtgkssimrsdapidtcisecitpngsipndkpfqnvnkitygacpkyvk
qntlklatgmrnvpekqtr

Timeline for d5vtra1:

• d5vtra1 first appeared in SCOPe 2.06
  
• d5vtra1 appears in SCOPe 2.07