Lineage for d1vsda_ (1vsd A:)

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2460924Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2462855Superfamily c.55.3: Ribonuclease H-like [53098] (16 families) (S)
    consists of one domain of this fold
  5. 2463135Family c.55.3.2: Retroviral integrase, catalytic domain [53107] (2 proteins)
  6. 2463136Protein Retroviral integrase, catalytic domain [53108] (4 species)
  7. 2463234Species Rous sarcoma virus RSV [TaxId:11886] [53109] (23 PDB entries)
  8. 2463240Domain d1vsda_: 1vsd A: [33625]
    complexed with epe, mg

Details for d1vsda_

PDB Entry: 1vsd (more details), 1.7 Å

PDB Description: asv integrase core domain with mg(ii) cofactor and hepes ligand, high mg concentration form
PDB Compounds: (A:) integrase

SCOPe Domain Sequences for d1vsda_:

Sequence; same for both SEQRES and ATOM records: (download)

>d1vsda_ c.55.3.2 (A:) Retroviral integrase, catalytic domain {Rous sarcoma virus RSV [TaxId: 11886]}

SCOPe Domain Coordinates for d1vsda_:

Click to download the PDB-style file with coordinates for d1vsda_.
(The format of our PDB-style files is described here.)

Timeline for d1vsda_: