Lineage for d2hmia1 (2hmi A:430-558)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2123752Family c.55.3.1: Ribonuclease H [53099] (5 protein domains)
  6. 2123803Protein HIV RNase H (Domain of reverse transcriptase) [53105] (3 species)
  7. 2123813Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (104 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. 2123906Domain d2hmia1: 2hmi A:430-558 [33604]
    Other proteins in same PDB: d2hmia2, d2hmib_, d2hmic1, d2hmic2, d2hmid1, d2hmid2
    protein/DNA complex

Details for d2hmia1

PDB Entry: 2hmi (more details), 2.8 Å

PDB Description: hiv-1 reverse transcriptase/fragment of fab 28/dna complex
PDB Compounds: (A:) subunit of v-1 reverse transcriptase

SCOPe Domain Sequences for d2hmia1:

Sequence; same for both SEQRES and ATOM records: (download)

>d2hmia1 c.55.3.1 (A:430-558) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d2hmia1:

Click to download the PDB-style file with coordinates for d2hmia1.
(The format of our PDB-style files is described here.)

Timeline for d2hmia1: