SCOPe 2.05: Domain d1hvuj1: 1hvu J:430-554

Lineage for d1hvuj1 (1hvu J:430-554)

Root: SCOPe 2.05
Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
Superfamily c.55.3: Ribonuclease H-like [53098] (15 families)
consists of one domain of this fold
Family c.55.3.1: Ribonuclease H [53099] (5 proteins)
Protein HIV RNase H (Domain of reverse transcriptase) [53105] (3 species)

Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (101 PDB entries)
Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595

Domain d1hvuj1: 1hvu J:430-554 [33603]
Other proteins in same PDB: d1hvua2, d1hvub_, d1hvud2, d1hvue_, d1hvug2, d1hvuh_, d1hvuj2, d1hvuk_
protein/RNA complex

Details for d1hvuj1

PDB Entry: 1hvu (more details), 4.75 Å

PDB Description: human immunodeficiency virus type 1 reverse transcriptase complexed with a 33-base nucleotide rna pseudoknot

PDB Compounds: (J:) protein (hiv-1 reverse transcriptase)

SCOPe Domain Sequences for d1hvuj1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1hvuj1 c.55.3.1 (J:430-554) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}
ekepivgaetfyvdgaanretklgkagyvtnkgrqkvvpltnttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdkseselvnqiieqlikkekvylawvpahkgiggneqvd
klvsa

SCOPe Domain Coordinates for d1hvuj1:

Click to download the PDB-style file with coordinates for d1hvuj1.
(The format of our PDB-style files is described here.)

Timeline for d1hvuj1: