Lineage for d1rtdc1 (1rtd C:430-554)

  1. Root: SCOPe 2.06
  2. 2078559Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2122050Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 2123751Superfamily c.55.3: Ribonuclease H-like [53098] (15 families) (S)
    consists of one domain of this fold
  5. 2123752Family c.55.3.1: Ribonuclease H [53099] (5 protein domains)
  6. 2123803Protein HIV RNase H (Domain of reverse transcriptase) [53105] (3 species)
  7. 2123813Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (104 PDB entries)
    Uniprot P04585 159-692 # chain A coverage; chain B is shorter: 162-582 ! Uniprot P03366 186-725 # chain A coverage; chain B coverage: 156-584 ! Uniprot P04585 158-698 # chain A coverage; chain B is shorter: 159-595
  8. 2123901Domain d1rtdc1: 1rtd C:430-554 [33592]
    Other proteins in same PDB: d1rtda2, d1rtdb_, d1rtdc2, d1rtdd_
    protein/DNA complex; complexed with mg, ttp

Details for d1rtdc1

PDB Entry: 1rtd (more details), 3.2 Å

PDB Description: structure of a catalytic complex of hiv-1 reverse transcriptase: implications for nucleoside analog drug resistance
PDB Compounds: (C:) protein (reverse transcriptase)

SCOPe Domain Sequences for d1rtdc1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rtdc1 c.55.3.1 (C:430-554) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1 [TaxId: 11676]}

SCOPe Domain Coordinates for d1rtdc1:

Click to download the PDB-style file with coordinates for d1rtdc1.
(The format of our PDB-style files is described here.)

Timeline for d1rtdc1: