Lineage for d1rt1a1 (1rt1 A:430-539)

  1. Root: SCOP 1.71
  2. 570216Class c: Alpha and beta proteins (a/b) [51349] (134 folds)
  3. 586264Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
    3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest
  4. 586646Superfamily c.55.3: Ribonuclease H-like [53098] (10 families) (S)
    consists of one domain of this fold
  5. 586647Family c.55.3.1: Ribonuclease H [53099] (3 proteins)
  6. 586660Protein HIV RNase H (Domain of reverse transcriptase) [53105] (2 species)
  7. 586661Species Human immunodeficiency virus type 1 [TaxId:11676] [53106] (85 PDB entries)
  8. 586670Domain d1rt1a1: 1rt1 A:430-539 [33579]
    Other proteins in same PDB: d1rt1a2, d1rt1b1
    complexed with mkc

Details for d1rt1a1

PDB Entry: 1rt1 (more details), 2.55 Å

PDB Description: crystal structure of hiv-1 reverse transcriptase complexed with mkc-442

SCOP Domain Sequences for d1rt1a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d1rt1a1 c.55.3.1 (A:430-539) HIV RNase H (Domain of reverse transcriptase) {Human immunodeficiency virus type 1}
ekepivgaetfyvdgaanretklgkagyvtnrgrqkvvtltdttnqktelqaiylalqds
glevnivtdsqyalgiiqaqpdqseselvnqiieqlikkekvylawvpah

SCOP Domain Coordinates for d1rt1a1:

Click to download the PDB-style file with coordinates for d1rt1a1.
(The format of our PDB-style files is described here.)

Timeline for d1rt1a1:

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Domains from same chain:
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d1rt1a2
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Domains from other chains:
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d1rt1b1