Lineage for d5usfd1 (5usf D:6-120)

  1. Root: SCOPe 2.07
  2. 2344607Class b: All beta proteins [48724] (178 folds)
  3. 2344608Fold b.1: Immunoglobulin-like beta-sandwich [48725] (33 superfamilies)
    sandwich; 7 strands in 2 sheets; greek-key
    some members of the fold have additional strands
  4. 2344609Superfamily b.1.1: Immunoglobulin [48726] (5 families) (S)
  5. 2344610Family b.1.1.1: V set domains (antibody variable domain-like) [48727] (33 proteins)
  6. 2347168Protein automated matches [190119] (20 species)
    not a true protein
  7. 2347651Species Llama (Lama glama) [TaxId:9844] [187485] (170 PDB entries)
  8. 2347906Domain d5usfd1: 5usf D:6-120 [334791]
    Other proteins in same PDB: d5usfc2, d5usfd2
    automated match to d4bfbe_
    protein/RNA complex; complexed with ysa

Details for d5usfd1

PDB Entry: 5usf (more details), 2.75 Å

PDB Description: leishmania donovani tyrosyl-trna synthetase in complex with nanobody and inhibitor
PDB Compounds: (D:) immunoglobulin heavy chain variable region

SCOPe Domain Sequences for d5usfd1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5usfd1 b.1.1.1 (D:6-120) automated matches {Llama (Lama glama) [TaxId: 9844]}
esggglvlpggslrlscatsgftfsnswmywvrqapgkglewvsrinaggntvdykdsvk
grfsisrdnakntlylqmnslkpedtavyycarglnryaydsrgqgtqvtvsshh

SCOPe Domain Coordinates for d5usfd1:

Click to download the PDB-style file with coordinates for d5usfd1.
(The format of our PDB-style files is described here.)

Timeline for d5usfd1:

  • d5usfd1 first appeared in SCOPe 2.06, called d5usfd_

View in 3D
Domains from same chain:
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d5usfd2