Lineage for d5x2pb_ (5x2p B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2912917Fold c.93: Periplasmic binding protein-like I [53821] (1 superfamily)
    consists of two similar intertwined domain with 3 layers (a/b/a) each: duplication
    parallel beta-sheet of 6 strands, order 213456
  4. 2912918Superfamily c.93.1: Periplasmic binding protein-like I [53822] (2 families) (S)
    Similar in architecture to the superfamily II but partly differs in topology
  5. 2913229Family c.93.1.0: automated matches [191439] (1 protein)
    not a true family
  6. 2913230Protein automated matches [190646] (77 species)
    not a true protein
  7. 2913484Species Oryzias latipes [TaxId:8090] [334713] (5 PDB entries)
  8. 2913502Domain d5x2pb_: 5x2p B: [334725]
    Other proteins in same PDB: d5x2ph_, d5x2pj_, d5x2pk1, d5x2pk2, d5x2pl1, d5x2pl2
    automated match to d4xara_
    complexed with ca, cl, glu, na, nag

Details for d5x2pb_

PDB Entry: 5x2p (more details), 2.61 Å

PDB Description: crystal structure of the medaka fish taste receptor t1r2a-t1r3 ligand binding domains in complex with l-glutamate
PDB Compounds: (B:) Taste receptor, type 1, member 3

SCOPe Domain Sequences for d5x2pb_:

Sequence, based on SEQRES records: (download)

>d5x2pb_ c.93.1.0 (B:) automated matches {Oryzias latipes [TaxId: 8090]}
pnwfnnistdlfsmpgdiklgglfpikeqsnevsndltklnsvscdslnkdglgralvmk
yaveeinansqllpgvklgykiyntcrhsavivrpalsflteksngtlsvecnytdyetd
mvavigpqssemvtvigkllgfflmpqisfgatsdkfsdslvypsffrtvpsdirqvdam
vqlikkfnwnwvavvgseeeygqqgvqqfskkaedmgvcvayqglipiyddpkpaiqtii
nniqttevkvvvvfslvspavsffeevikknltgvwiassswaisdkvyslpnidsigtv
igfidetetlellspftevlfkkiheasptekpedpynpcpecwslspanvslvkeesvq
rtafsvyaavytvahalhkllecnsaackwssstrlypwkllevlkefsvnisntslkfd
qngnpnigysviqriwenqslssvgsyrsanlsinetlfkwytnnsekpe

Sequence, based on observed residues (ATOM records): (download)

>d5x2pb_ c.93.1.0 (B:) automated matches {Oryzias latipes [TaxId: 8090]}
pnwfnnistdlfsmpgdiklgglfpikeqssvscdslnkdglgralvmkyaveeinansq
llpgvklgykiyntcrhsavivrpalsflteksngtlsvecnytdyetdmvavigpqsse
mvtvigkllgfflmpqisfgatsdkfsdslvypsffrtvpsdirqvdamvqlikkfnwnw
vavvgseeeygqqgvqqfskkaedmgvcvayqglipiyddpkpaiqtiinniqttevkvv
vvfslvspavsffeevikknltgvwiassswaisdkvyslpnidsigtvigfidetetle
llspftevlfkkiheasptynpcpecwslspanvslvkeesvqrtafsvyaavytvahal
hkllecnsaackwssstrlypwkllevlkefsvnisntslkfdqngnpnigysviqriwe
nqslssvgsyrsanlsinetlfkwytnnsekpe

SCOPe Domain Coordinates for d5x2pb_:

Click to download the PDB-style file with coordinates for d5x2pb_.
(The format of our PDB-style files is described here.)

Timeline for d5x2pb_: