Lineage for d5v69a2 (5v69 A:1543-1802)

  1. Root: SCOPe 2.07
  2. 2494617Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2497139Fold d.3: Cysteine proteinases [54000] (1 superfamily)
    consists of one alpha-helix and 4 strands of antiparallel beta-sheet and contains the catalytic triad Cys-His-Asn
  4. 2497140Superfamily d.3.1: Cysteine proteinases [54001] (24 families) (S)
    the constitute families differ by insertion into and circular permutation of the common catalytic core made of one alpha-helix and 3-strands of beta-sheet
  5. 2498013Family d.3.1.23: Papain-like viral protease catalytic domain [310648] (2 proteins)
    C-terminal part of Pfam PF08715
  6. 2498014Protein Papain-like protease PLpro, catalytic domain [310795] (4 species)
  7. 2498015Species Human betacoronavirus 2c EMC/2012 [TaxId:1235996] [311055] (5 PDB entries)
  8. 2498019Domain d5v69a2: 5v69 A:1543-1802 [334684]
    Other proteins in same PDB: d5v69a1, d5v69b_
    automated match to d4pt5a2
    complexed with cl, na, pgo, zn

Details for d5v69a2

PDB Entry: 5v69 (more details), 2.55 Å

PDB Description: crystal structure of the middle east respiratory syndrome coronavirus papain-like protease bound to ubiquitin variant me.4
PDB Compounds: (A:) MERS-CoV PLpro

SCOPe Domain Sequences for d5v69a2:

Sequence; same for both SEQRES and ATOM records: (download)

>d5v69a2 d.3.1.23 (A:1543-1802) Papain-like protease PLpro, catalytic domain {Human betacoronavirus 2c EMC/2012 [TaxId: 1235996]}

SCOPe Domain Coordinates for d5v69a2:

Click to download the PDB-style file with coordinates for d5v69a2.
(The format of our PDB-style files is described here.)

Timeline for d5v69a2:

View in 3D
Domains from same chain:
(mouse over for more information)
View in 3D
Domains from other chains:
(mouse over for more information)