Lineage for d5vl1a1 (5vl1 A:9-153)

  1. Root: SCOPe 2.08
  2. 2739516Class b: All beta proteins [48724] (180 folds)
  3. 2787872Fold b.40: OB-fold [50198] (17 superfamilies)
    barrel, closed or partly opened n=5, S=10 or S=8; greek-key
  4. 2789270Superfamily b.40.4: Nucleic acid-binding proteins [50249] (18 families) (S)
  5. 2790411Family b.40.4.0: automated matches [191416] (1 protein)
    not a true family
  6. 2790412Protein automated matches [190576] (52 species)
    not a true protein
  7. 2790561Species Mycobacterium ulcerans [TaxId:362242] [334392] (2 PDB entries)
  8. 2790566Domain d5vl1a1: 5vl1 A:9-153 [334675]
    Other proteins in same PDB: d5vl1a2, d5vl1b2, d5vl1c2, d5vl1d2
    automated match to d3bjua1
    protein/RNA complex; complexed with lys, peg, pge

Details for d5vl1a1

PDB Entry: 5vl1 (more details), 2.7 Å

PDB Description: crystal structure of lysyl-trna synthetase from mycobacterium ulcerans complexed with l-lysine
PDB Compounds: (A:) Lysine--tRNA ligase

SCOPe Domain Sequences for d5vl1a1:

Sequence; same for both SEQRES and ATOM records: (download)

>d5vl1a1 b.40.4.0 (A:9-153) automated matches {Mycobacterium ulcerans [TaxId: 362242]}
peqfrirrdkrarllaegydpypvaierthtlaeiratyadlptdsatedivgvagrvvf
arntgklcfatlqdgdgtqlqamisldevgresldrwkadvdigdvvyvhgtvissrrge
lsvladswrmaakalrplpvahkem

SCOPe Domain Coordinates for d5vl1a1:

Click to download the PDB-style file with coordinates for d5vl1a1.
(The format of our PDB-style files is described here.)

Timeline for d5vl1a1: