SCOPe 2.06: Domain d5vl1c2: 5vl1 C:154-494

Lineage for d5vl1c2 (5vl1 C:154-494)

1. Root: SCOPe 2.06

2. Class d: Alpha and beta proteins (a+b) [53931] (385 folds)

3. Fold d.104: Class II aaRS and biotin synthetases [55680] (1 superfamily)
   contains large mixed beta-sheet

4. Superfamily d.104.1: Class II aaRS and biotin synthetases [55681] (5 families)

5. Family d.104.1.0: automated matches [227172] (1 protein)
   not a true family

6. Protein automated matches [226887] (13 species)
   not a true protein

7. Species Mycobacterium ulcerans [TaxId:362242] [334394] (2 PDB entries)

8. Domain d5vl1c2: 5vl1 C:154-494 [334496]
   Other proteins in same PDB: d5vl1a1, d5vl1b1, d5vl1c1, d5vl1d1
   automated match to d3bjua2
   protein/RNA complex; complexed with lys, peg, pge

Details for d5vl1c2

PDB Entry: 5vl1, 2.7 Å

PDB Description: crystal structure of lysyl-trna synthetase from mycobacterium ulcerans complexed with l-lysine

PDB Compounds: (C:) Lysine--tRNA ligase

SCOPe Domain Sequences for d5vl1c2:

Sequence; same for both SEQRES and ATOM records:

>d5vl1c2 d.104.1.0 (C:154-494) automated matches {Mycobacterium ulcerans [TaxId: 362242]}
seesrvrqryvdlivrpqarevarqriaviravrnalerrgflevetpmlqtlaggaaar
pfvthsnaldidlylriapelflkrcivggfdrvfelnrvfrnegsdsthspefsmlety
qtygtyddsalitreliqevadeaigtrqlsmpdgsvydidgewatmemysslsealgeq
itpettvarlrdiasgldveidnsvfghgklveelwehavgnkltaptfvkdfpvettpl
trqhrsipgvtekwdlyvrgvelatgyselndpvvqrdrfadqaraaaagddeamqlded
fltaleygmppctgtgmgidrllmcltglsiretvlfpivr

Timeline for d5vl1c2:

• d5vl1c2 is new in SCOPe 2.06-stable
  
• d5vl1c2 appears in SCOPe 2.07
  
• d5vl1c2 appears in the current release, SCOPe 2.08