SCOPe 2.08: Domain d5lu4b3: 5lu4 B:516-872

Lineage for d5lu4b3 (5lu4 B:516-872)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.0: automated matches [191427] (1 protein)
   not a true family

6. Protein automated matches [190614] (15 species)
   not a true protein

7. Species Flaveria trinervia [TaxId:4227] [332556] (3 PDB entries)

8. Domain d5lu4b3: 5lu4 B:516-872 [334481]
   Other proteins in same PDB: d5lu4a1, d5lu4a2, d5lu4b1, d5lu4b2
   automated match to d1vbga1
   complexed with adp, mg, pyr

Details for d5lu4b3

PDB Entry: 5lu4, 2.9 Å

PDB Description: c4-type pyruvate phosphate dikinase: conformational intermediate of central domain in the swiveling mechanism

PDB Compounds: (B:) Pyruvate, phosphate dikinase, chloroplastic

SCOPe Domain Sequences for d5lu4b3:

Sequence, based on SEQRES records:

>d5lu4b3 c.1.12.0 (B:516-872) automated matches {Flaveria trinervia [TaxId: 4227]}
pamsndleifmswadqarrlkvmanadtpndaltarnngaqgiglcrtehmffasderik
avrkmimavtpeqrkvaldlllpyqrsdfegiframdglpvtirlldpplheflpegdle
hivnelavdtgmsadeiyskienlsevnpmlgfrgcrlgisypeltemqvraifqaavsm
tnqgvtvipeimvplvgtpqelrhqisvirgvaanvfaemgvtleykvgtmieipraali
aeeigkeadffsfgtndltqmtfgysrddvgkflqiylaqgilqhdpfevidqkgvgqli
kmatekgraanpslkvgicgehggepssvaffdgvgldyvscspfrvpiarlaaaqv

Sequence, based on observed residues (ATOM records):

>d5lu4b3 c.1.12.0 (B:516-872) automated matches {Flaveria trinervia [TaxId: 4227]}
pamsndleifmswadqarrlkvmanadtpndaltarnngaqgiglcrtehmffasderik
avrkmimavtpeqrkvaldlllpyqrsdfegiframdglpvtirlldpplheflkienls
evnpmlgfrgcrlgisypeltemqvraifqaavsmtnqgvtvipeimvplvgtpqelrhq
isvirgvaanvfaemgvtleykvgtmieipraaliaeeigkeadffsfgtndltqmtfgy
srddvgkflqiylaqgilqhdpfevidqkgvgqlikmatekgraanpslkvgicgehgge
pssvaffdgvgldyvscspfrvpiarlaaaqv

Timeline for d5lu4b3:

• d5lu4b3 first appeared in SCOPe 2.06
  
• d5lu4b3 appears in SCOPe 2.07