SCOPe 2.08: Domain d5g5ub1: 5g5u B:1-332

Lineage for d5g5ub1 (5g5u B:1-332)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.8: (Trans)glycosidases [51445] (15 families)

5. Family c.1.8.0: automated matches [191314] (1 protein)
   not a true family

6. Protein automated matches [190075] (132 species)
   not a true protein

7. Species Pseudomonas aeruginosa [TaxId:208964] [332878] (7 PDB entries)

8. Domain d5g5ub1: 5g5u B:1-332 [334436]
   Other proteins in same PDB: d5g5ua2, d5g5ub2
   automated match to d3gs6a_
   mutant

Details for d5g5ub1

PDB Entry: 5g5u, 2.25 Å

PDB Description: crystal structure of nagz h174a mutant from pseudomonas aeruginosa

PDB Compounds: (B:) Beta-hexosaminidase

SCOPe Domain Sequences for d5g5ub1:

Sequence; same for both SEQRES and ATOM records:

>d5g5ub1 c.1.8.0 (B:1-332) automated matches {Pseudomonas aeruginosa [TaxId: 208964]}
mqgslmldiggtwltaedrqilrhpevggliifarniehpaqvrelcaairairpdllla
vdqeggrvqrlrqgfvrlpamraiadnpnaeelaehcgwlmatevqavgldlsfapvldl
dhqrsavvgsrafegdperaallagafirgmhaagmaatgkhfpghgwaeadsavaiped
arsleeirrsdlvpfarlagqldalmpahviypqvdpqpagfsrrwlqeilrgelkfdgv
ifsddlsmagahvvgdaasrieaalaagcdmglvcndrasaelalaalqrlkvtppsrlq
rmrgkgyantdyrqqprwlealsalraaqlid

Timeline for d5g5ub1:

• d5g5ub1 first appeared in SCOPe 2.06
  
• d5g5ub1 appears in SCOPe 2.07