Lineage for d5jgib_ (5jgi B:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2383785Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2383786Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2383809Family b.18.1.2: Discoidin domain (FA58C, coagulation factor 5/8 C-terminal domain) [49791] (4 proteins)
    automatically mapped to Pfam PF00754
  6. 2383810Protein B1 domain of neuropilin-1 [82016] (2 species)
  7. 2383811Species Human (Homo sapiens) [TaxId:9606] [82017] (9 PDB entries)
  8. 2383813Domain d5jgib_: 5jgi B: [334286]
    Other proteins in same PDB: d5jgia2
    automated match to d1kexa_
    complexed with aag

Details for d5jgib_

PDB Entry: 5jgi (more details), 1.38 Å

PDB Description: x-ray structure of neuropilin-1 b1 domain complexed with m45 compound
PDB Compounds: (B:) Neuropilin-1

SCOPe Domain Sequences for d5jgib_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5jgib_ b.18.1.2 (B:) B1 domain of neuropilin-1 {Human (Homo sapiens) [TaxId: 9606]}
kcmealgmesgeihsdqitassqystnwsaersrlnypengwtpgedsyrewiqvdlgll
rfvtavgtqgaisketkkkyyvktykidvssngedwitikegnkpvlfqgntnptdvvva
vfpkplitrfvrikpatwetgismrfevygckit

SCOPe Domain Coordinates for d5jgib_:

Click to download the PDB-style file with coordinates for d5jgib_.
(The format of our PDB-style files is described here.)

Timeline for d5jgib_: