SCOPe 2.06: Domain d1dkgd1: 1dkg D:3-185

Lineage for d1dkgd1 (1dkg D:3-185)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.55: Ribonuclease H-like motif [53066] (7 superfamilies)
   3 layers: a/b/a; mixed beta-sheet of 5 strands, order 32145; strand 2 is antiparallel to the rest

4. Superfamily c.55.1: Actin-like ATPase domain [53067] (16 families)
   duplication contains two domains of this fold

5. Family c.55.1.1: Actin/HSP70 [53068] (8 proteins)

6. Protein Heat shock protein 70kDa, ATPase fragment [53069] (3 species)

7. Species Escherichia coli, gene dnaK [TaxId:562] [53072] (1 PDB entry)

8. Domain d1dkgd1: 1dkg D:3-185 [33427]
   Other proteins in same PDB: d1dkga1, d1dkga2, d1dkgb1, d1dkgb2

Details for d1dkgd1

PDB Entry: 1dkg, 2.8 Å

PDB Description: crystal structure of the nucleotide exchange factor grpe bound to the atpase domain of the molecular chaperone dnak

PDB Compounds: (D:) molecular chaperone dnak

SCOPe Domain Sequences for d1dkgd1:

Sequence, based on SEQRES records:

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
kiigidlgttnscvaimdgttprvlenaegdrttpsiiaytqdgetlvgqpakrqavtnp
qntlfaikrligrrfqdeevqrdvsimpfkiiaadngdawvevkgqkmappqisaevlkk
mkktaedylgepvteavitvpayfndaqrqatkdagriaglevkriineptaaalaygld
kgt

Sequence, based on observed residues (ATOM records):

>d1dkgd1 c.55.1.1 (D:3-185) Heat shock protein 70kDa, ATPase fragment {Escherichia coli, gene dnaK [TaxId: 562]}
kiigidlgttnscvaimdgttprvlenaegdrttpsiiaytqdgetlvgqpakrqavtnp
qntlfaikrligrrfqdeevqrdvsimpfkiiaadngdawvevkgqkmappqisaevlkk
mkktaedylgepvteavitvpayfndaqrqatkdagriaglevkriineptaaalaygld
kt

Timeline for d1dkgd1:

• d1dkgd1 first appeared (with stable ids) in SCOP 1.55
  
• d1dkgd1 appears in SCOPe 2.05
  
• d1dkgd1 appears in SCOPe 2.07
  
• d1dkgd1 appears in the current release, SCOPe 2.08