SCOPe 2.08: Domain d5jgoa_: 5jgo A:

Lineage for d5jgoa_ (5jgo A:)

1. Root: SCOPe 2.08

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (34 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.20: tRNA-guanine transglycosylase [51713] (1 family)

5. Family c.1.20.1: tRNA-guanine transglycosylase [51714] (2 proteins)

6. Protein Queosine tRNA-guanine transglycosylase [51715] (3 species)
   contains zinc-binding subdomain

7. Species Zymomonas mobilis [TaxId:542] [51716] (156 PDB entries)
   Uniprot P28720

8. Domain d5jgoa_: 5jgo A: [334194]
   automated match to d1p0ba_
   protein/RNA complex; complexed with 6jx, edo, gol, zn

Details for d5jgoa_

PDB Entry: 5jgo, 1.37 Å

PDB Description: trna guanine transglycosylase (tgt) in co-crystallized complex with allyl (2-(methylamino)-8-oxo-7,8-dihydro-1h-imidazo[4,5-g]quinazolin- 6-yl)carbamate

PDB Compounds: (A:) Queuine tRNA-ribosyltransferase

SCOPe Domain Sequences for d5jgoa_:

Sequence, based on SEQRES records:

>d5jgoa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshld
gsrhmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsr
keqaenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvp
mlpddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfse
dlkpldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegr
fsqfaqdfraryfa

Sequence, based on observed residues (ATOM records):

>d5jgoa_ c.1.20.1 (A:) Queosine tRNA-guanine transglycosylase {Zymomonas mobilis [TaxId: 542]}
drprfsfsiaaregkartgtiemkrgvirtpafmpvgtaatvkalkpetvratgadiilg
ntyhlmlrpgaeriaklgglhsfmgwdrpiltdsggyqvmslssltkqseegvtfkshsr
hmlspersieiqhllgsdivmafdectpypatpsraassmersmrwakrsrdafdsrkeq
aenaalfgiqqgsvfenlrqqsadalaeigfdgyavgglavgegqdemfrvldfsvpmlp
ddkphylmgvgkpddivgavergidmfdcvlptrsgrngqaftwdgpinirnarfsedlk
pldsechcavcqkwsrayihhlirageilgamlmtehniafyqqlmqkirdsisegrfsq
faqdfraryfa

Timeline for d5jgoa_:

• d5jgoa_ first appeared in SCOPe 2.06
  
• d5jgoa_ appears in SCOPe 2.07