Lineage for d5j5yd_ (5j5y D:)

  1. Root: SCOPe 2.07
  2. 2530962Class d: Alpha and beta proteins (a+b) [53931] (388 folds)
  3. 2569268Fold d.86: eIF4e-like [55417] (1 superfamily)
    beta(2)-alpha-beta(2)-alpha-beta(2)-alpha-beta-2; 2 layers: alpha/beta; antiparallel sheet: 21356478
  4. 2569269Superfamily d.86.1: eIF4e-like [55418] (3 families) (S)
  5. 2569270Family d.86.1.1: Translation initiation factor eIF4e [55419] (1 protein)
    automatically mapped to Pfam PF01652
  6. 2569271Protein Translation initiation factor eIF4e [55420] (3 species)
    messenger RNA 5' cap-binding protein
  7. 2569303Species Mouse (Mus musculus) [TaxId:10090] [55421] (24 PDB entries)
  8. 2569319Domain d5j5yd_: 5j5y D: [334124]
    automated match to d1l8bb_
    protein/RNA complex; complexed with 6g6, gol

Details for d5j5yd_

PDB Entry: 5j5y (more details), 1.75 Å

PDB Description: translation initiation factor 4e in complex with m2(7,2'o)gppccl2ppg mrna 5' cap analog
PDB Compounds: (D:) eukaryotic translation initiation factor 4e

SCOPe Domain Sequences for d5j5yd_:

Sequence, based on SEQRES records: (download)

>d5j5yd_ d.86.1.1 (D:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
pehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmpgcd
yslfkdgiepmwedeknkrggrwlitlnkqqrrsdldrfwletllcligesfddysddvc
gavvnvrakgdkiaiwttecenrdavthigrvykerlglppkivigyqshadtatksgst
tknrfv

Sequence, based on observed residues (ATOM records): (download)

>d5j5yd_ d.86.1.1 (D:) Translation initiation factor eIF4e {Mouse (Mus musculus) [TaxId: 10090]}
pehyikhplqnrwalwffkndksktwqanlrliskfdtvedfwalynhiqlssnlmcdys
lfkdgiepmwedekngrwlitlnkqqrrsdldrfwletllcligesfddysdvcgavvnv
rakgdkiaiwttnrdavthigrvykerlglpyqshadtnrfv

SCOPe Domain Coordinates for d5j5yd_:

Click to download the PDB-style file with coordinates for d5j5yd_.
(The format of our PDB-style files is described here.)

Timeline for d5j5yd_: