Lineage for Species: Escherichia coli [TaxId: 562]

  1. Root: SCOPe 2.07
  2. 2413226Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2492420Fold c.116: alpha/beta knot [75216] (1 superfamily)
    core: 3 layers: a/b/a, parallel beta-sheet of 5 strands, order 21435; contains a deep trefoil knot
  4. 2492421Superfamily c.116.1: alpha/beta knot [75217] (9 families) (S)
    known or predicted SAM-dependent methytransferases including the SPOUT 'sequence' superfamily
    all known members have dimeric structures
  5. 2492455Family c.116.1.3: YbeA-like [82371] (5 proteins)
    Pfam PF02590
  6. 2492481Protein automated matches [195222] (2 species)
    not a true protein
  7. 2492482Species Escherichia coli [TaxId:562] [333863] (2 PDB entries)

PDB entries in Species: Escherichia coli [TaxId: 562]:

  1. Domain(s) for 5twj:
    1. 2492487Domain d5twja1: 5twj A:2-155 [333900]
      Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sam
    2. 2492488Domain d5twjb1: 5twj B:2-155 [333877]
      Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sam
    3. 2492489Domain d5twjc1: 5twj C:2-155 [333908]
      Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sam
    4. 2492490Domain d5twjd1: 5twj D:2-155 [334016]
      Other proteins in same PDB: d5twja2, d5twjb2, d5twjc2, d5twjd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sam
  2. Domain(s) for 5twk:
    1. 2492483Domain d5twka1: 5twk A:2-155 [333864]
      Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sfg
    2. 2492484Domain d5twkb1: 5twk B:2-155 [333885]
      Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sfg
    3. 2492485Domain d5twkc1: 5twk C:2-155 [333887]
      Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sfg
    4. 2492486Domain d5twkd1: 5twk D:2-155 [333961]
      Other proteins in same PDB: d5twka2, d5twkb2, d5twkc2, d5twkd2
      automated match to d1ns5b_
      protein/RNA complex; complexed with sfg

More info for Species Escherichia coli [TaxId:562] from c.116.1.3 automated matches

Timeline for Species Escherichia coli [TaxId:562] from c.116.1.3 automated matches: