SCOPe 2.08: Domain d5jo7b2: 5jo7 B:228-555

Lineage for d5jo7b2 (5jo7 B:228-555)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.128: Terpenoid synthases [48575] (1 superfamily)
   multihelical; core: 8 helices (C-J) are arranged in 2 parallel layers

4. Superfamily a.128.1: Terpenoid synthases [48576] (6 families)
   duplication: two metal-binding sites are related by a pseudo dyad that also relates helices C-F to helices G-J

5. Family a.128.1.3: Terpenoid cyclase C-terminal domain [48583] (3 proteins)
   automatically mapped to Pfam PF03936

6. Protein automated matches [227033] (2 species)
   not a true protein

7. Species Hyoscyamus muticus [TaxId:35626] [333735] (1 PDB entry)

8. Domain d5jo7b2: 5jo7 B:228-555 [333820]
   Other proteins in same PDB: d5jo7a1, d5jo7b1, d5jo7c1, d5jo7d1
   automated match to d3m00a2

Details for d5jo7b2

PDB Entry: 5jo7, 2.15 Å

PDB Description: henbane premnaspirodiene synthase (hps), also known as henbane vetispiradiene synthase (hvs) from hyoscyamus muticus

PDB Compounds: (B:) Vetispiradiene synthase 1

SCOPe Domain Sequences for d5jo7b2:

Sequence, based on SEQRES records:

>d5jo7b2 a.128.1.3 (B:228-555) automated matches {Hyoscyamus muticus [TaxId: 35626]}
kndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardravecyfwtmgvyae
pqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqidrlpeymkisyk
alldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegympsvseylsnala
tstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiatyevekgrgqiat
giecymrdygvstevamekfqemadiawkdvneeilrptpvsseiltrilnlariidvty
khnqdgythpekvlkphiialvvdsidi

Sequence, based on observed residues (ATOM records):

>d5jo7b2 a.128.1.3 (B:228-555) automated matches {Hyoscyamus muticus [TaxId: 35626]}
kndlllrfakldynllqmlhkhelsevsrwwkdldfvttlpyardravecyfwtmgvyae
pqysqarvmlaktiamisivddtfdaygivkelevytdaiqrwdisqidrlpeymkisyk
alldlyddyekelskdgrsdvvhyakermkeivrnyfieakwfiegympsvseylsnala
tstyylltttsylgmksatkehfewlatnpkileanatlcrvvddiatyevqiatgiecy
mrdygvstevamekfqemadiawkdvneeilrptpvsseiltrilnlariidvtykhpek
vlkphiialvvdsidi

Timeline for d5jo7b2:

• d5jo7b2 first appeared in SCOPe 2.06
  
• d5jo7b2 appears in SCOPe 2.07