Lineage for d5kidb_ (5kid B:)

  1. Root: SCOPe 2.07
  2. 2352458Class b: All beta proteins [48724] (178 folds)
  3. 2413759Fold b.60: Lipocalins [50813] (1 superfamily)
    barrel, closed or opened; n=8, S=12; meander
  4. 2413760Superfamily b.60.1: Lipocalins [50814] (10 families) (S)
    bind hydrophobic ligands in their interior
  5. 2413761Family b.60.1.1: Retinol binding protein-like [50815] (22 proteins)
    barrel, closed; n=8, S=12, meander
  6. 2413962Protein Neutrophil gelatinase-associated lipocalin (NGAL) [50835] (1 species)
  7. 2413963Species Human (Homo sapiens) [TaxId:9606] [50836] (50 PDB entries)
  8. 2414025Domain d5kidb_: 5kid B: [333618]
    automated match to d1l6ma_
    complexed with 7k9, cl, gol, so4, th

Details for d5kidb_

PDB Entry: 5kid (more details), 2.15 Å

PDB Description: tightening the recognition of tetravalent zr and th complexes by the siderophore-binding mammalian protein siderocalin for theranostic applications
PDB Compounds: (B:) Neutrophil gelatinase-associated lipocalin

SCOPe Domain Sequences for d5kidb_:

Sequence, based on SEQRES records: (download)

>d5kidb_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailredkdpqkmyatiyelkedksy
nvtsvlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffk
kvsqnreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

Sequence, based on observed residues (ATOM records): (download)

>d5kidb_ b.60.1.1 (B:) Neutrophil gelatinase-associated lipocalin (NGAL) {Human (Homo sapiens) [TaxId: 9606]}
sdlipapplskvplqqnfqdnqfqgkwyvvglagnailrpqkmyatiyelkedksynvts
vlfrkkkcdywirtfvpgsqpgeftlgniksypgltsylvrvvstnynqhamvffkkvsq
nreyfkitlygrtkeltselkenfirfskslglpenhivfpvpidqcid

SCOPe Domain Coordinates for d5kidb_:

Click to download the PDB-style file with coordinates for d5kidb_.
(The format of our PDB-style files is described here.)

Timeline for d5kidb_: