SCOPe 2.06: Domain d1dzfa1: 1dzf A:5-143

Lineage for d1dzfa1 (1dzf A:5-143)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.3: Eukaryotic RPB5 N-terminal domain [53036] (1 family)

5. Family c.52.3.1: Eukaryotic RPB5 N-terminal domain [53037] (2 proteins)

6. Protein Eukaryotic RPB5 N-terminal domain [53038] (2 species)

7. Species Baker's yeast (Saccharomyces cerevisiae) [TaxId:4932] [53039] (26 PDB entries)
   Uniprot P20434; part of multichain biological unit

8. Domain d1dzfa1: 1dzf A:5-143 [33344]
   Other proteins in same PDB: d1dzfa2

Details for d1dzfa1

PDB Entry: 1dzf, 1.9 Å

PDB Description: RPB5 from S.cerevisiae

PDB Compounds: (A:) DNA-directed RNA polymerases I, II, and III subunit rpabc 1

SCOPe Domain Sequences for d1dzfa1:

Sequence; same for both SEQRES and ATOM records:

>d1dzfa1 c.52.3.1 (A:5-143) Eukaryotic RPB5 N-terminal domain {Baker's yeast (Saccharomyces cerevisiae) [TaxId: 4932]}
nernisrlwrafrtvkemvkdrgyfitqeevelpledfkakycdsmgrpqrkmmsfqanp
teesiskfpdmgslwvefcdepsvgvktmktfvihiqeknfqtgifvyqnnitpsamklv
psippatietfneaalvvn

Timeline for d1dzfa1:

• d1dzfa1 first appeared (with stable ids) in SCOP 1.55
  
• d1dzfa1 appears in SCOPe 2.05
  
• d1dzfa1 appears in SCOPe 2.07
  
• d1dzfa1 appears in the current release, SCOPe 2.08