Lineage for Species: Fusobacterium nucleatum [TaxId: 190304]

  1. Root: SCOPe 2.08
  2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. Fold c.79: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53685] (1 superfamily)
    consists of two similar domains related by pseudo dyad; duplication
    core: 3 layers, a/b/a; parallel beta-sheet of 4 strands, order 3214
  4. Superfamily c.79.1: Tryptophan synthase beta subunit-like PLP-dependent enzymes [53686] (2 families) (S)
  5. Family c.79.1.0: automated matches [191338] (1 protein)
    not a true family
  6. Protein automated matches [190215] (38 species)
    not a true protein
  7. Species Fusobacterium nucleatum [TaxId:190304] [333378] (6 PDB entries)

PDB entries in Species: Fusobacterium nucleatum [TaxId: 190304]:

  1. Domain(s) for 5b53:
  2. Domain(s) for 5b55:
    1. Domain d5b55a_: 5b55 A: [333380]
      automated match to d5d86a_
      complexed with 0jo, peg, plp; mutant
    2. Domain d5b55b_: 5b55 B: [333379]
      automated match to d5d86a_
      complexed with 0jo, peg, plp; mutant
  3. Domain(s) for 5xem:
    1. Domain d5xema1: 5xem A:2-302 [350975]
      Other proteins in same PDB: d5xema2
      automated match to d4aeca_
      complexed with 85f, act, ca, peg, pg0, pg5, plp
    2. Domain d5xemb_: 5xem B: [350980]
      Other proteins in same PDB: d5xema2
      automated match to d4aeca_
      complexed with 85f, act, ca, peg, pg0, pg5, plp
  4. Domain(s) for 5xen:
    1. Domain d5xena1: 5xen A:2-300 [351018]
      Other proteins in same PDB: d5xena2
      automated match to d4aeca_
      complexed with act, ca, peg, plp, ser
    2. Domain d5xenb_: 5xen B: [351037]
      Other proteins in same PDB: d5xena2
      automated match to d4aeca_
      complexed with act, ca, peg, plp, ser
  5. Domain(s) for 5xeo:
    1. Domain d5xeoa1: 5xeo A:2-300 [350982]
      Other proteins in same PDB: d5xeoa2
      automated match to d4aeca_
      complexed with act, ca, peg, plp
    2. Domain d5xeob_: 5xeo B: [351010]
      Other proteins in same PDB: d5xeoa2
      automated match to d4aeca_
      complexed with act, ca, peg, plp
  6. Domain(s) for 5z5c:
    1. Domain d5z5ca_: 5z5c A: [349064]
      Other proteins in same PDB: d5z5cb2
      automated match to d5b53a_
      complexed with cl, plp
    2. Domain d5z5cb1: 5z5c B:2-335 [349094]
      Other proteins in same PDB: d5z5cb2
      automated match to d5b53a_
      complexed with cl, plp
    3. Domain d5z5cc_: 5z5c C: [349072]
      Other proteins in same PDB: d5z5cb2
      automated match to d5b53a_
      complexed with cl, plp
    4. Domain d5z5cd_: 5z5c D: [349015]
      Other proteins in same PDB: d5z5cb2
      automated match to d5b53a_
      complexed with cl, plp

More info for Species Fusobacterium nucleatum [TaxId:190304] from c.79.1.0 automated matches

Timeline for Species Fusobacterium nucleatum [TaxId:190304] from c.79.1.0 automated matches: