Lineage for d5mgda5 (5mgd A:846-1007)

  1. Root: SCOPe 2.06
  2. 2021373Class b: All beta proteins [48724] (177 folds)
  3. 2046279Fold b.18: Galactose-binding domain-like [49784] (1 superfamily)
    sandwich; 9 strands in 2 sheets; jelly-roll
  4. 2046280Superfamily b.18.1: Galactose-binding domain-like [49785] (35 families) (S)
  5. 2047120Family b.18.1.0: automated matches [191481] (1 protein)
    not a true family
  6. 2047121Protein automated matches [190770] (37 species)
    not a true protein
  7. 2047131Species Aspergillus niger [TaxId:425011] [333185] (6 PDB entries)
  8. 2047135Domain d5mgda5: 5mgd A:846-1007 [333263]
    Other proteins in same PDB: d5mgda1, d5mgda2, d5mgda3, d5mgda6
    automated match to d1tg7a3
    complexed with 1pe, bma, cl, dms, gal, glc, man, nag

Details for d5mgda5

PDB Entry: 5mgd (more details), 2.15 Å

PDB Description: structure of e298q-beta-galactosidase from aspergillus niger in complex with 6-galactosyl-lactose
PDB Compounds: (A:) Probable beta-galactosidase A

SCOPe Domain Sequences for d5mgda5:

Sequence; same for both SEQRES and ATOM records: (download)

>d5mgda5 b.18.1.0 (A:846-1007) automated matches {Aspergillus niger [TaxId: 425011]}
edkvrgplnegglyaerqgfhqpeppsqnwkssspleglseagigfysasfdldlpkgwd
vplflnignsttpspyrvqvyvngyqyakyisnigpqtsfpvpegilnyrgtnwlavtlw
aldsaggkleslelsyttpvltalgevesvdqpkykkrkgay

SCOPe Domain Coordinates for d5mgda5:

Click to download the PDB-style file with coordinates for d5mgda5.
(The format of our PDB-style files is described here.)

Timeline for d5mgda5: