Lineage for d5x2xd_ (5x2x D:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2895166Fold c.67: PLP-dependent transferase-like [53382] (3 superfamilies)
    main domain: 3 layers: a/b/a, mixed beta-sheet of 7 strands, order 3245671; strand 7 is antiparallel to the rest
  4. 2895167Superfamily c.67.1: PLP-dependent transferases [53383] (10 families) (S)
  5. 2895682Family c.67.1.3: Cystathionine synthase-like [53402] (17 proteins)
  6. 2895835Protein Methionine gamma-lyase, MGL [64126] (4 species)
  7. 2895846Species Pseudomonas putida [TaxId:303] [75271] (15 PDB entries)
    Uniprot P13254
  8. 2895874Domain d5x2xd_: 5x2x D: [333158]
    automated match to d1ukja_
    complexed with 4lm, h2s

Details for d5x2xd_

PDB Entry: 5x2x (more details), 2 Å

PDB Description: crystal structure of pseudomonas putida methionine gamma-lyase wild type with l-homocysteine intermediates
PDB Compounds: (D:) L-methionine gamma-lyase

SCOPe Domain Sequences for d5x2xd_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5x2xd_ c.67.1.3 (D:) Methionine gamma-lyase, MGL {Pseudomonas putida [TaxId: 303]}
mhgsnklpgfatraihhgydpqdhggalvppvyqtatftfptveygaacfageqaghfys
risnptlnllearmasleggeaglalasgmgaitstlwtllrpgdevllgntlygctfaf
lhhgigefgvklrhvdmadlqaleaamtpatrviyfespanpnmhmadiagvakiarkhg
atvvvdntyctpylqrplelgadlvvhsatkylsghgditagivvgsqalvdrirlqglk
dmtgavlsphdaallmrgiktlnlrmdrhcanaqvlaeflarqpqvelihypglasfpqy
tlarqqmsqpggmiafelkggigagrrfmnalqlfsravslgdaeslaqhpasmthssyt
peerahygiseglvrlsvglediddlladvqqalkasa

SCOPe Domain Coordinates for d5x2xd_:

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(The format of our PDB-style files is described here.)

Timeline for d5x2xd_: