SCOPe 2.05: Domain d3pvia_: 3pvi A:

Lineage for d3pvia_ (3pvi A:)

1. Root: SCOPe 2.05

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.52: Restriction endonuclease-like [52979] (4 superfamilies)
   core: 3 layers, a/b/a; mixed beta-sheet of 5 strands, order 12345; strands 2 &, in some families, 5 are antiparallel to the rest

4. Superfamily c.52.1: Restriction endonuclease-like [52980] (35 families)

5. Family c.52.1.6: Restriction endonuclease PvuII [52996] (2 proteins)
   automatically mapped to Pfam PF09225

6. Protein Restriction endonuclease PvuII [52997] (1 species)

7. Species Proteus vulgaris [TaxId:585] [52998] (9 PDB entries)

8. Domain d3pvia_: 3pvi A: [33300]
   protein/DNA complex; mutant

Details for d3pvia_

PDB Entry: 3pvi, 1.59 Å

PDB Description: d34g mutant of pvuii endonuclease complexed with cognate dna shows that asp34 is directly involved in dna recognition and indirectly involved in catalysis

PDB Compounds: (A:) protein (pvuii endonuclease)

SCOPe Domain Sequences for d3pvia_:

Sequence; same for both SEQRES and ATOM records:

>d3pvia_ c.52.1.6 (A:) Restriction endonuclease PvuII {Proteus vulgaris [TaxId: 585]}
shpdlnkllelwphiqeyqdlalkhgindifqgnggkllqvllitgltvlpgregndavd
nagqeyelksinidltkgfsthhhmnpviiakyrqvpwifaiyrgiaieaiyrlepkdle
fyydkwerkwysdghkdinnpkipvkyvmehgtkiy

Timeline for d3pvia_:

• d3pvia_ first appeared (with stable ids) in SCOP 1.55
  
• d3pvia_ appears in SCOPe 2.04
  
• d3pvia_ appears in SCOPe 2.06
  
• d3pvia_ appears in the current release, SCOPe 2.08