SCOPe 2.06: Domain d5jvna3: 5jvn A:514-874

Lineage for d5jvna3 (5jvn A:514-874)

1. Root: SCOPe 2.06

2. Class c: Alpha and beta proteins (a/b) [51349] (148 folds)

3. Fold c.1: TIM beta/alpha-barrel [51350] (33 superfamilies)
   contains parallel beta-sheet barrel, closed; n=8, S=8; strand order 12345678
   the first seven superfamilies have similar phosphate-binding sites

4. Superfamily c.1.12: Phosphoenolpyruvate/pyruvate domain [51621] (8 families)

5. Family c.1.12.0: automated matches [191427] (1 protein)
   not a true family

6. Protein automated matches [190614] (15 species)
   not a true protein

7. Species Flaveria pringlei [TaxId:4226] [332632] (1 PDB entry)

8. Domain d5jvna3: 5jvn A:514-874 [332633]
   Other proteins in same PDB: d5jvna1, d5jvna2, d5jvna4
   automated match to d2x0sa1
   complexed with 6nq, mg, pep

Details for d5jvna3

PDB Entry: 5jvn, 2.9 Å

PDB Description: c3-type pyruvate phosphate dikinase: intermediate state of the central domain in the swiveling mechanism

PDB Compounds: (A:) Pyruvate, phosphate dikinase, chloroplastic

SCOPe Domain Sequences for d5jvna3:

Sequence; same for both SEQRES and ATOM records:

>d5jvna3 c.1.12.0 (A:514-874) automated matches {Flaveria pringlei [TaxId: 4226]}
appamsndletfmswadqvrrlkvmanadtpndaltarnngaqgiglcrtehmffasder
ikavrkmimavtpeqrkaaldlllpyqrsdfegiframdglpvtirlldpplheflpegd
lehivnelavdtgmsedeiyskieklsevnpmlgfrgcrlgisypeltemqvraifqaav
smnnqgvtvipeimvplvgtpqelrhqigvirgvaanvfaemgltmdykvgtmieipraa
liaeeiakeaeffsfgtndltqmtfgysrddvgkflqiylsqgilqhdpfevldqkgvgq
likmatekgraanpnlkvgicgehggepssvaffdgvgldyvscspfrvpiarlaaaqvv
v

Timeline for d5jvna3:

• d5jvna3 is new in SCOPe 2.06-stable
  
• d5jvna3 appears in SCOPe 2.07
  
• d5jvna3 appears in the current release, SCOPe 2.08