SCOPe 2.07: Domain d5jvjb1: 5jvj B:2-380

Lineage for d5jvjb1 (5jvj B:2-380)

1. Root: SCOPe 2.07

2. Class d: Alpha and beta proteins (a+b) [53931] (388 folds)

3. Fold d.142: ATP-grasp [56058] (2 superfamilies)
   Consists of two subdomains with different alpha+beta folds
   shares functional and structural similarities with the PIPK and protein kinase superfamilies

4. Superfamily d.142.1: Glutathione synthetase ATP-binding domain-like [56059] (11 families)

5. Family d.142.1.0: automated matches [227184] (1 protein)
   not a true family

6. Protein automated matches [226904] (38 species)
   not a true protein

7. Species Flaveria trinervia [TaxId:4227] [332552] (3 PDB entries)

8. Domain d5jvjb1: 5jvj B:2-380 [332553]
   Other proteins in same PDB: d5jvja2, d5jvja3, d5jvjb2, d5jvjb3
   automated match to d1vbga3
   complexed with mg, pep

Details for d5jvjb1

PDB Entry: 5jvj, 2.9 Å

PDB Description: c4-type pyruvate phosphate dikinase: different conformational states of the nucleotide binding domain in the dimer

PDB Compounds: (B:) Pyruvate, phosphate dikinase, chloroplastic

SCOPe Domain Sequences for d5jvjb1:

Sequence, based on SEQRES records:

>d5jvjb1 d.142.1.0 (B:2-380) automated matches {Flaveria trinervia [TaxId: 4227]}
krvftfgkgrsegnrdmksllggkganlaemssiglsvppgltisteaceeyqqngkslp
pglwdeisegldyvqkemsaslgdpskplllsvrsgaaismpgmmdtvlnlglndevvag
lagksgarfaydsyrrfldmfgnvvmgiphslfdekleqmkaekgihldtdltaadlkdl
vekyknvyveakgekfptdpkkqlelavnavfdswdsprankyrsinqitglkgtavniq
smvfgnmgntsgtgvlftrnpstgekklygeflinaqgedvvagirtpedlgtmetcmpe
aykelvenceilerhykdmmdieftvqenrlwmlqcrtgkrtgkgavriavdmvneglid
trtaikrvetqhldqllhp

Sequence, based on observed residues (ATOM records):

>d5jvjb1 d.142.1.0 (B:2-380) automated matches {Flaveria trinervia [TaxId: 4227]}
krvftfgkgrsegnrdggkganlaemssiglsvppgltisdeisegldyvqkemsaskpl
llsvrsgaaidtvlnlglndevvksgarfaydsyrrfldmfgnvvmgiphslfdekleqm
kihldtdltaadlkdlvekyknvyvetdpkkqlelavnavfdsavniqsmvfgnmgntsg
tgvlftrnpstgekklygeflinaqgedvvagirtpedlgtmetcmpeaykelvenceil
erhykdmmdieftvqenrlwmlqcrtgkrtgkgavriavdmvneglidtrtaikrvetqh
ldqllhp

Timeline for d5jvjb1:

• d5jvjb1 first appeared in SCOPe 2.06
  
• d5jvjb1 appears in the current release, SCOPe 2.08