Lineage for d5k3ob_ (5k3o B:)

  1. Root: SCOPe 2.08
  2. 2826024Class c: Alpha and beta proteins (a/b) [51349] (148 folds)
  3. 2911318Fold c.88: Glutaminase/Asparaginase [53773] (1 superfamily)
    consists of two non-similar alpha/beta domains, 3 layers (a/b/a) each
    Domain 1 has mixed beta-sheet of 6 strands, order 213456, strand 6 is antiparallel to the rest; left-handed crossover connection between strands 4 and 5
    Domain 2 has parallel beta-sheet of 4 strands, order 1234
  4. 2911319Superfamily c.88.1: Glutaminase/Asparaginase [53774] (2 families) (S)
  5. 2911320Family c.88.1.1: Glutaminase/Asparaginase [53775] (4 proteins)
    automatically mapped to Pfam PF00710
  6. 2911321Protein Asparaginase type II [53776] (5 species)
  7. 2911537Species Wolinella succinogenes [TaxId:273121] [332353] (8 PDB entries)
  8. 2911556Domain d5k3ob_: 5k3o B: [332354]
    automated match to d1wsaa_
    complexed with asp

Details for d5k3ob_

PDB Entry: 5k3o (more details), 1.7 Å

PDB Description: wolinella succinogenes l-asparaginase p121 and l-aspartic acid
PDB Compounds: (B:) L-asparaginase

SCOPe Domain Sequences for d5k3ob_:

Sequence; same for both SEQRES and ATOM records: (download)

>d5k3ob_ c.88.1.1 (B:) Asparaginase type II {Wolinella succinogenes [TaxId: 273121]}
kpqvtilatggtiagsgessvkssysagavtvdkllaavpaindlatikgeqissigsqe
mtgkvwlklakrvnellaqketeaviithgtdtmeetafflnltvksqkpvvlvgamrpg
ssmsadgpmnlynavnvainkastnkgvvivmndeihaareatklnttavnafaspntgk
igtvyygkveyftqsvrphtlasefdiskieelprvdilyahpddtdvlvnaalqagakg
iihagmgngnpfpltqnalekaaksgvvvarssrvgsgsttqeaevddkklgfvatesln
pqkarvllmlaltktsdreaiqkifsty

SCOPe Domain Coordinates for d5k3ob_:

Click to download the PDB-style file with coordinates for d5k3ob_.
(The format of our PDB-style files is described here.)

Timeline for d5k3ob_: