SCOPe 2.08: Domain d5u40b_: 5u40 B:

Lineage for d5u40b_ (5u40 B:)

1. Root: SCOPe 2.08

2. Class a: All alpha proteins [46456] (290 folds)

3. Fold a.123: Nuclear receptor ligand-binding domain [48507] (1 superfamily)
   multihelical; 3 layers or orthogonally packed helices

4. Superfamily a.123.1: Nuclear receptor ligand-binding domain [48508] (2 families)

5. Family a.123.1.1: Nuclear receptor ligand-binding domain [48509] (34 proteins)

6. Protein Peroxisome proliferator-activated receptor delta, PPAR-DELTA [48526] (1 species)

7. Species Human (Homo sapiens) [TaxId:9606] [48527] (37 PDB entries)

8. Domain d5u40b_: 5u40 B: [332162]
   automated match to d2p4ya_
   complexed with 7ud, b7g, peg, pgo

Details for d5u40b_

PDB Entry: 5u40, 2 Å

PDB Description: human ppardelta ligand-binding domain in complexed with specific agonist 15

PDB Compounds: (B:) Peroxisome proliferator-activated receptor delta

SCOPe Domain Sequences for d5u40b_:

Sequence, based on SEQRES records:

>d5u40b_ a.123.1.1 (B:) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwkqlvn
glppykeisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifam
lasivnkdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfia
aiilcgdrpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvteh
aqmmqrikktetetslhpllqeiyk

Sequence, based on observed residues (ATOM records):

>d5u40b_ a.123.1.1 (B:) Peroxisome proliferator-activated receptor delta, PPAR-DELTA {Human (Homo sapiens) [TaxId: 9606]}
dlkafskhiynaylknfnmtkkkarsiltgkashtapfvihdietlwqaekglvwlppyk
eisvhvfyrcqcttvetvreltefaksipsfsslflndqvtllkygvheaifamlasivn
kdgllvangsgfvtreflrslrkpfsdiiepkfefavkfnalelddsdlalfiaaiilcg
drpglmnvprveaiqdtilralefhlqanhpdaqylfpkllqkmadlrqlvtehaqmmqr
ikktetetslhpllqeiyk

Timeline for d5u40b_:

• d5u40b_ first appeared in SCOPe 2.06
  
• d5u40b_ appears in SCOPe 2.07